DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Frq1 and XB5856770

DIOPT Version :9

Sequence 1:NP_001033853.1 Gene:Frq1 / 32797 FlyBaseID:FBgn0030897 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_001096526.1 Gene:XB5856770 / 100125166 XenbaseID:XB-GENE-5856771 Length:211 Species:Xenopus tropicalis


Alignment Length:156 Identity:57/156 - (36%)
Similarity:100/156 - (64%) Gaps:11/156 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 EIRQWHKGFLKDCPNGLLTEQGFIKIYKQFFPQGDPSKFASLVFRVFDENNDGSIEFEEFIRALS 90
            |:.:|::.|:::||:||:|...|.|.:.......:.|::|..:||..|:|.||.::|.|::.|:|
 Frog    17 ELHEWYRKFVQECPSGLITLHEFRKYFCDCTVGTESSEYAEKIFRNLDKNGDGIVDFREYVTAIS 81

  Fly    91 VTSKGNLDEKLQWAFRLYDVDNDGYITREEMYNIVDAIYQM------VGQQPQSEDENTPQKRVD 149
            :.::|:.:|||:|:|.|||.|.||.|||.||.:|:.|:|:|      ....|.:.:|.|     :
 Frog    82 MLAQGSPEEKLRWSFELYDKDRDGTITRCEMLDIMKAVYKMSLATSLAQSNPPTAEECT-----N 141

  Fly   150 KIFDQMDKNHDGKLTLEEFREGSKAD 175
            :||.::||:|:..::|:||.:||..|
 Frog   142 RIFIRLDKDHNALISLQEFIDGSLDD 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Frq1NP_001033853.1 FRQ1 9..178 CDD:227455 57/156 (37%)
XB5856770NP_001096526.1 FRQ1 17..167 CDD:227455 56/154 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D495747at33208
OrthoFinder 1 1.000 - - FOG0000038
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

Return to query results.
Submit another query.