DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ari-1 and rnf144b

DIOPT Version :10

Sequence 1:NP_523399.1 Gene:ari-1 / 32796 FlyBaseID:FBgn0017418 Length:503 Species:Drosophila melanogaster
Sequence 2:NP_957431.2 Gene:rnf144b / 394112 ZFINID:ZDB-GENE-040426-1292 Length:312 Species:Danio rerio


Alignment Length:213 Identity:69/213 - (32%)
Similarity:97/213 - (45%) Gaps:16/213 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 KQKTS---RSQCEECEICFSQLPPDSMAGLE-CGHRFCMPCWHEYLSTKIVAEGLGQTISCAAHG 182
            :||.|   :|....|::|.|..|......|: |...||..|..:|:...|.| |.|..|:|....
Zfish    16 QQKASMDGKSTTIHCKLCLSDWPEAETCTLQSCSCVFCAQCLRQYVQLAIRA-GAGSAITCPDPA 79

  Fly   183 C---DILVDDVTVANLVTDARVRVKYQQLITNSFVECNQLLRWCPSVDCTYAVKV-PYAE--PRR 241
            |   ..|:|. .:|:.....:|.: ||:|.....|:.:....|||.:.|.....| |..|  |..
Zfish    80 CKNSGTLLDS-ELASFAPSDQVEL-YQRLRFERGVQLDPSKAWCPVLACQAVCSVTPGTEGTPVP 142

  Fly   242 VHCK-CGHVFCFACGENWHDPVKCRWLKKWIKKCDDDSETSNWIAANTKECPRCSVTIEKDGGCN 305
            |.|. |..|||..|...|.|...|...:..:....|.:.:|:...|..|:||.|.|.||::.||.
Zfish   143 VPCPVCQTVFCCCCRSPWSDGHSCSLQQPLMPPLPDGALSSDDTEAAIKQCPVCGVYIERNQGCA 207

  Fly   306 HMVCKNQNCKNEFCWVCL 323
            .|:||  :||:.|||.||
Zfish   208 QMLCK--SCKHTFCWYCL 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ari-1NP_523399.1 RING-HC_RBR_HHARI 131..189 CDD:438288 18/61 (30%)
BRcat_RBR_HHARI-like 198..279 CDD:439004 24/84 (29%)
Rcat_RBR_HHARI-like 283..340 CDD:439017 20/41 (49%)
Ariadne 341..>459 CDD:466073
rnf144bNP_957431.2 mRING-HC-C4C4_RBR_RNF144 28..80 CDD:438294 16/52 (31%)
BRcat_Rcat_RBR 112..174 CDD:459240 19/61 (31%)
Rcat_RBR_RNF144B 185..255 CDD:439030 20/41 (49%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.