DRSC/TRiP Functional Genomics Resources

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Protein Alignment ari-1 and pdr-1

DIOPT Version :9

Sequence 1:NP_001245736.1 Gene:ari-1 / 32796 FlyBaseID:FBgn0017418 Length:503 Species:Drosophila melanogaster
Sequence 2:NP_001370029.1 Gene:pdr-1 / 176816 WormBaseID:WBGene00003967 Length:386 Species:Caenorhabditis elegans


Alignment Length:372 Identity:84/372 - (22%)
Similarity:134/372 - (36%) Gaps:106/372 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 LTTD-----EIVQHQREII------DEANLLLKLP-TPTTRILLNHFKWDK-------------- 90
            ||.|     ||...:.|::      .::.::..|. ||.|:|:|...|::.              
 Worm    33 LTKDVEKLTEIPSDELEVVFCGKKLSKSTIMRDLSLTPATQIMLLRPKFNSHNENGATTAKITTD 97

  Fly    91 EKLLEKYF--DDNTDEF---------FKCAHV-----INPFNATEAIKQKTSRSQCEEC------ 133
            ..:|..::  ..|.|:.         .||:..     ..|.|.::.:|.|...:.||||      
 Worm    98 SSILGSFYVWCKNCDDVKRGKLRVYCQKCSSTSVLVKSEPQNWSDVLKSKRIPAVCEECCTPGLF 162

  Fly   134 ---------------------------EICFSQLPPDSMAGLECGHRFCMPCWHEYLSTKIVAEG 171
                                       |.|........:..|.|.|..|..|:.:||.:::...|
 Worm   163 AEFKFKCLACNDPAAALTHVRGNWQMTECCVCDGKEKVIFDLGCNHITCQFCFRDYLLSQLERFG 227

  Fly   172 L------GQTISCAAHGCDILVDDVTVANLVTDARVRVKYQQLITNSFVECNQLLRWCPSVDCTY 230
            .      |.||.|...||:.:|.||...:::...... :||:..|...:..:.....||:|.|..
 Worm   228 FVNQPPHGFTIFCPYPGCNRVVQDVHHFHIMGQTSYS-EYQRKATERLIAVDDKGVTCPNVSCGQ 291

  Fly   231 A-VKVPYAEPRRVHC-KCGHVFCFACGENWHDPVKCRWLKKWIKKC---DDDSETSNWIAANTKE 290
            : ...||.:..|..| .|...||..|.|               :.|   .:|..|...|.|.|:.
 Worm   292 SFFWEPYDDDGRSQCPDCFFSFCRKCFE---------------RNCVCQSEDDLTRTTIDATTRR 341

  Fly   291 CPRCSVTIEKDGGCNHMVCKNQNCKNEFCWVCLGSW--EPHGSSWYN 335
            ||:|.|..|::|||.|:.|  .:|..::|:.|...|  |.....|:|
 Worm   342 CPKCHVATERNGGCAHIHC--TSCGMDWCFKCKTEWKEECQWDHWFN 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ari-1NP_001245736.1 IBR 204..264 CDD:214763 16/61 (26%)
IBR <286..326 CDD:279784 15/39 (38%)
pdr-1NP_001370029.1 Ubl_ubiquitin_like 13..77 CDD:340559 11/43 (26%)
RING0_parkin 104..182 CDD:412057 12/77 (16%)
zf-RING_14 182..268 CDD:407824 20/86 (23%)
IBR 266..317 CDD:418646 14/50 (28%)
IBR <336..375 CDD:396187 15/40 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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