DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ari-1 and Rnf144a

DIOPT Version :10

Sequence 1:NP_523399.1 Gene:ari-1 / 32796 FlyBaseID:FBgn0017418 Length:503 Species:Drosophila melanogaster
Sequence 2:XP_006515007.1 Gene:Rnf144a / 108089 MGIID:1344401 Length:313 Species:Mus musculus


Alignment Length:256 Identity:69/256 - (26%)
Similarity:106/256 - (41%) Gaps:42/256 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 LEKYFDDNTDEFFKCAHVINPFNATEAIKQK----TSRSQCEECEICFSQLPPDSMAGL-ECGHR 153
            :.:..|.|||.   |...:...:|....:.:    .:......|::|..:.|.:.|..: :|...
Mouse     1 MSRRMDHNTDH---CVISLEDCSAMTTARYRPTWDLALDPLVSCKLCLGEYPAEQMTTIAQCQCI 62

  Fly   154 FCMPCWHEYLSTKIVAEGLGQTISCAAHGC----DILVDDVTVANLVTDARVRVKYQQLITNSFV 214
            ||..|..:|:.. ::.|||...|||....|    .:..:::   ..:..|.:..:|::|.....|
Mouse    63 FCTLCLKQYVEL-LIKEGLETAISCPDAACPKQGHLQENEI---ECMVAAEIMQRYKKLQFEREV 123

  Fly   215 ECNQLLRWCPSVDCTYAVK---VPYAEPRRVHCK-CGHVFCFACGENWHDPVKC------RWLKK 269
            ..:....|||:..|....:   :....|:.|.|| |...||.||...||....|      .:|  
Mouse   124 LFDPCRTWCPASTCQAVCQLQDIGLQTPQLVQCKACDMEFCSACKARWHPGQGCPETMPITFL-- 186

  Fly   270 WIKKCDDDSETSNWIA-----ANTKECPRCSVTIEKDGGCNHMVCKNQNCKNEFCWVCLGS 325
                   ..|||:...     |..|.||:|.|.||:|.||..|:||  |||:.|||.||.|
Mouse   187 -------PGETSSAFKMEEGDAPIKRCPKCRVYIERDEGCAQMMCK--NCKHAFCWYCLES 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ari-1NP_523399.1 RING-HC_RBR_HHARI 131..189 CDD:438288 16/62 (26%)
BRcat_RBR_HHARI-like 198..279 CDD:439004 21/90 (23%)
Rcat_RBR_HHARI-like 283..340 CDD:439017 23/48 (48%)
Ariadne 341..>459 CDD:466073
Rnf144aXP_006515007.1 mRING-HC-C4C4_RBR_RNF144A 39..93 CDD:438433 16/54 (30%)
BRcat_RBR_RNF144A 120..184 CDD:439027 17/63 (27%)
Rcat_RBR_RNF144 200..268 CDD:439013 23/41 (56%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.