DRSC/TRiP Functional Genomics Resources

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Protein Alignment ari-1 and cul9

DIOPT Version :9

Sequence 1:NP_001245736.1 Gene:ari-1 / 32796 FlyBaseID:FBgn0017418 Length:503 Species:Drosophila melanogaster
Sequence 2:XP_021326622.1 Gene:cul9 / 100332758 -ID:- Length:2587 Species:Danio rerio


Alignment Length:535 Identity:137/535 - (25%)
Similarity:213/535 - (39%) Gaps:86/535 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DNDNDFCDNVDSGNVSSGDDGDDDFGMEVDLPSSADRQMDQDDYQYKVL-------TTDEIVQHQ 61
            |.......:..||. .||...|...|..:..|     |..:|.....||       |.:|:.|..
Zfish  2003 DGKKSSASSSSSGG-GSGSKADTSLGGLIVPP-----QHTEDGVLEAVLFSMGRTMTQEEVKQLM 2061

  Fly    62 REIIDEANLLLKLPTPTTRILLNHFKWDKEKLLEKYFDDNTDEFFKCA--HVINPFNATEAIKQK 124
            :..:.:....|.|.......||.|.||:.:.|:::|.|| .|.....|  .:.||..|...:   
Zfish  2062 QRTVQQVAGTLSLDLDRAEHLLIHCKWNVDLLIQRYTDD-PDALVLAAGLKIRNPQPAPGPV--- 2122

  Fly   125 TSRSQCEECEICFSQL----PPDSMAGLECGHRFCMPCWHEYLSTKIVAEGLGQTISCAAHGCDI 185
                  ..|.:|.||.    ||..:.   |.|..|..||.|:|:.:| .:.|.....|....|..
Zfish  2123 ------SHCPVCLSQSKESDPPPMLC---CMHYCCRSCWQEFLTARI-EQNLVMNCDCPITDCRA 2177

  Fly   186 LVDDVTVANLVTDARVRVKYQQLITNSFVECNQLLRWCPSVD-CTYAVKVPYAEPRRVHCKCGHV 249
            ........|::||.....||...:...||||...|.||.:.. |...:............||...
Zfish  2178 QPTSKFFHNILTDKDTIAKYDSALLRGFVECCSNLTWCTNPQGCDQILCKENIGSMGTCSKCCWS 2242

  Fly   250 FCFACG-ENWHDPVKCRWLKKWIKKCDD---------DSETSNWIAANTKECPRCSVTIEKDGGC 304
            .||:|. ...|.|..|..:.:|:   ||         ::::.:.....:|.||.|...|||:.||
Zfish  2243 SCFSCNFPEAHYPASCSHMSQWM---DDGGYYEGMSMEAQSKHLAKLISKRCPSCQAQIEKNEGC 2304

  Fly   305 NHMVCKNQNCKNEFCWVCLGSWEPHGSSWYNCNRYDEDEAKTARDAQEKLRSSLARYLHYYNRYM 369
            .||.|  ..|.:.|||.||..|:|....:|||:..   .:|.||  |||      ::..|..|..
Zfish  2305 LHMTC--AKCNHGFCWRCLKPWKPTHKDYYNCSAM---VSKAAR--QEK------KFQDYNERCT 2356

  Fly   370 NHMQSMKF----ENKLYASVKQKMEEMQQHNMSWIEVQFLKKAVDILCQCRQTLMYTYVFAYYLK 430
            .|:|:..|    |||:: |:.   |.:|..:::     |:..|..||.|.|:.|.|:.|::||.:
Zfish  2357 FHIQAKDFAINLENKVF-SIN---EALQMKSLT-----FVIDACKILAQARKVLAYSCVYSYYNQ 2412

  Fly   431 KNNQSMIFEDNQKDLESATEMLSEYLERDITS-ENLADIKQKVQDKY--------RYCEKRCSVL 486
            ...:..:.|...:.|:..|..|...||..:.. .:||...:.::.::        |..::|...:
Zfish  2413 DTEKMDVMEQQTEALDLHTNALQILLEETLLQCTDLASCVRLLKPEHLNTGLELIRRIQERLVAI 2477

  Fly   487 LKHVHE----GYDKE 497
            |:|..:    ||..:
Zfish  2478 LQHSTQDFRVGYQSK 2492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ari-1NP_001245736.1 IBR 204..264 CDD:214763 17/61 (28%)
IBR <286..326 CDD:279784 18/39 (46%)
cul9XP_021326622.1 Cul7 416..490 CDD:314424
APC10-CUL7 1200..1330 CDD:176486
Cullin <1548..1850 CDD:331336
Cullin_Nedd8 1902..1979 CDD:214883
RING-HC_RBR_CUL9 2124..2175 CDD:319538 16/54 (30%)
RING-HC finger (C3HC4-type) 2125..2175 CDD:319538 16/53 (30%)
IBR 2195..2258 CDD:214763 17/62 (27%)
IBR <2289..2324 CDD:307574 18/36 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469819at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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