DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wupA and Tnni1

DIOPT Version :10

Sequence 1:NP_728142.1 Gene:wupA / 32794 FlyBaseID:FBgn0283471 Length:269 Species:Drosophila melanogaster
Sequence 2:XP_006249924.1 Gene:Tnni1 / 29388 RGDID:621765 Length:236 Species:Rattus norvegicus


Alignment Length:189 Identity:58/189 - (30%)
Similarity:95/189 - (50%) Gaps:25/189 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 EEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELKKEQERKAAERRRIIEERCGS--PRNLSDAS 149
            :.:|..:|:|   :|..||..|:.|:..||.|..::|.|.:.||:.|.:.||..:  .|.||.::
  Rat    49 DPSSSERKSK---ITASRKLMLKSLMLAKAKECWEQEHEEREAEKVRYLSERIPTLQTRGLSLSA 110

  Fly   150 EGELQEICEEYYERMYICEGQKWDLEYEVRKKDWEINDLNAQVNDLRGKFVKPALKKVSKYENKF 214
               ||::|.|.:.::.:.:.:::|:|.:......||.||..:|.||||||.:|.|::|....:..
  Rat   111 ---LQDLCRELHAKVEVVDEERYDIEAKCLHNTREIKDLKLKVLDLRGKFKRPPLRRVRVSADAM 172

  Fly   215 AKL---QKKAAEFNFRNQLKVVKKKEFTLEEEEKEKK---PDWSK------GKPGDAKV 261
            .:.   .|.....:.|..||.|||     |:.|||:.   .||.|      |..|..|:
  Rat   173 LRALLGSKHKVSMDLRANLKSVKK-----EDTEKERPVEVGDWRKNVEAMSGMEGRKKM 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wupANP_728142.1 Troponin 116..233 CDD:460018 36/121 (30%)
Tnni1XP_006249924.1 Troponin 64..195 CDD:460018 40/133 (30%)

Return to query results.
Submit another query.