DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mvb12 and Mvb12b

DIOPT Version :10

Sequence 1:NP_573268.1 Gene:Mvb12 / 32791 FlyBaseID:FBgn0030894 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_001258161.1 Gene:Mvb12b / 362118 RGDID:1309709 Length:317 Species:Rattus norvegicus


Alignment Length:335 Identity:78/335 - (23%)
Similarity:131/335 - (39%) Gaps:106/335 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 LPDN--RPITSLHIVEDFERCPKNFSAISRTYDQDSDADLWRDYSLFGRQNTRYLCLSKS----- 109
            ||:.  .|||.:.:|....|.|..:..:::|.| ..|||||:| .||..:.|||||.::|     
  Rat    40 LPETPMDPITGVGVVASRNRAPTGYDVVAQTAD-GVDADLWKD-GLFKSKVTRYLCFTRSFSKEN 102

  Fly   110 EGLPEYVVETLQVISDKTPPPKEFSQVSRTADSDQKAWRKRQLIYKLSKRGTVTQAVTDIILCSK 174
            ..|...:|: :::|..|...|..|..:..|.|:.:..:||::|..|...|.:...|:.||.:..:
  Rat   103 SHLGNVLVD-MKLIDVKDTLPVGFIPIQETVDTQEVVFRKKRLCIKFIPRDSTEAAICDIRIMGR 166

  Fly   175 LKAAPDGFKLAGDINGVLICYKTSAIPVRLSPPVPGGGLPAPATCEVEQALNRLNLQGQRNSRGP 239
            .|.||..:...|::|.:.|.|:...:|                                ||....
  Rat   167 TKQAPPQYTFIGELNSMGIWYRMGRVP--------------------------------RNHDSS 199

  Fly   240 LPQPPTEHHDYEEIQANYQINSPQRPAP--PR------PAGVGSGGGHGTYGGTGTLGTYTE--- 293
            .|..|:            |.::...|||  ||      ||         |:.|.....|..|   
  Rat   200 QPTTPS------------QSSAASTPAPNLPRHISLTLPA---------TFRGRNNTSTDYEYQL 243

  Fly   294 --------LEGVPFVMDVRLQRNQAVNDIP-----------TLPEISTLLKSLDYDFQLERQILC 339
                    ::||||::      ::..:.||           |:..::.:.|..:|.|:.|     
  Rat   244 SNLYAISAMDGVPFMI------SEKFSCIPESMQPFDLLGITIKSLAEIEKEYEYSFRTE----- 297

  Fly   340 TMKSSASKNP 349
              :|:|::.|
  Rat   298 --QSAAARLP 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mvb12NP_573268.1 DUF2464 56..334 CDD:463017 72/312 (23%)
Mvb12bNP_001258161.1 DUF2464 46..297 CDD:463017 72/312 (23%)

Return to query results.
Submit another query.