DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP16F and BEM3

DIOPT Version :10

Sequence 1:NP_001285400.1 Gene:RhoGAP16F / 32790 FlyBaseID:FBgn0030893 Length:581 Species:Drosophila melanogaster
Sequence 2:NP_015210.1 Gene:BEM3 / 855988 SGDID:S000006036 Length:1128 Species:Saccharomyces cerevisiae


Alignment Length:495 Identity:101/495 - (20%)
Similarity:180/495 - (36%) Gaps:146/495 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 GFVAHERRQPGKTLMNCFRDRSTTS-----SSSSQAQHAYVRGHS--VTSSTLFRLEGSGGSNCT 83
            ||:..|.::.|         .||::     :.:|:.:..::...|  :..|....|..|..:|.|
Yeast   702 GFLITEHKKSG---------LSTSTKYYICTETSKERELWLSAFSDYIDPSQSLSLSSSRNANDT 757

  Fly    84 LDKAGKQDTGRPEAVVLLRELKTRPNKLALLKSSSSKDLTRLFLDDSTNTAVLVSNTSIDVCSSN 148
             |.|.....|            |..:|......|            :|:|...|::.:.:..::|
Yeast   758 -DSASHLSAG------------THHSKFGNATIS------------ATDTPSYVTDLTQEYNNNN 797

  Fly   149 SSSGGSPAVGRSKSGRDRRNGLECCSSCSKRWHDLKQRMHTLEQDLLVQTTYSQELEQKVGEMSR 213
            :.|..|..:..|       :|::...|                       ::|..|....|... 
Yeast   798 NISNSSNNIANS-------DGIDSNPS-----------------------SHSNFLASSSGNAE- 831

  Fly   214 QLTELLQERDRERDKDKARF--------AAAG---GVAAPGKRTAHGSPN---VRPSRLVAWMNL 264
                  :|:|..|.|.::.|        |:|.   |:.......:..||:   ..||:.:..::.
Yeast   832 ------EEKDSRRAKMRSLFPFKKLTGPASAMNHIGITISNDSDSPTSPDSIIKSPSKKLMEVSS 890

  Fly   265 SNWFKSRPSVETLREQRIFFDEPCFDTELEMVLKHDQHR-----TVPRIVVDCCDLIEQKYRRST 324
            |:...:.|.|.|          ..|.:.||..|:...|:     .:|.:|..|   :|..|:...
Yeast   891 SSNSSTGPHVST----------AIFGSSLETCLRLSSHKYQNVYDLPSVVYRC---LEYLYKNRG 942

  Fly   325 QPIEGIYRQCGDYNKIQTL--RF-------------SIDANDYDSLRQPDVDIHTLTGVLKLFLR 374
            ...|||:|..|....|:||  ||             ||:|.|.::.....:.::|::|:|||:||
Yeast   943 IQEEGIFRLSGSSTVIKTLQERFDKEYDVDLCRYNESIEAKDDEASPSLYIGVNTVSGLLKLYLR 1007

  Fly   375 EIKSPLVRVNEAKTF--IGQPNQWLLTDLSAKLDSLKRLIRS--LPESNRDTMDYIF-------- 427
            ::...|....:..:|  :...|......:|.   ..|.||.|  :|.:|...|..:|        
Yeast  1008 KLPHLLFGDEQFLSFKRVVDENHNNPVQISL---GFKELIESGLVPHANLSLMYALFELLVRINE 1069

  Fly   428 -GHFNRITKVPLQQISAETLSISVT---PSI--FHTVPQG 461
             ..||::....|..:.:.||:|.::   |.|  |..:.||
Yeast  1070 NSKFNKMNLRNLCIVFSPTLNIPISMLQPFITDFACIFQG 1109

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP16FNP_001285400.1 RhoGAP 306..487 CDD:238090 49/189 (26%)
BEM3NP_015210.1 PX 520..622 CDD:214610
PH_Bem3 633..741 CDD:270096 8/47 (17%)
RhoGAP 904..1110 CDD:470621 54/212 (25%)
Blue background indicates that the domain is not in the aligned region.

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