DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP16F and Gmip

DIOPT Version :10

Sequence 1:NP_001285400.1 Gene:RhoGAP16F / 32790 FlyBaseID:FBgn0030893 Length:581 Species:Drosophila melanogaster
Sequence 2:XP_030099716.1 Gene:Gmip / 78816 MGIID:1926066 Length:1002 Species:Mus musculus


Alignment Length:447 Identity:104/447 - (23%)
Similarity:163/447 - (36%) Gaps:110/447 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 SNSSSGGSPAVGRSKSGRDRRNGLECCSSCSKRWHDLKQRMHTLEQDLLVQTTYSQELEQKVGEM 211
            |.|.|..||.   |..|...|..::..|:.::...|.::|    :.||      ...:|..||..
Mouse   441 SESRSLDSPT---SSPGAGARRLVKASSTGTESSDDFEER----DPDL------GDGIENGVGSP 492

  Fly   212 SRQLT--------ELLQERDRERDKDKARFAAAGGVAAPGKRTAH-----------GSPNVRPSR 257
            .|:.|        .|.:.|...:.::...|..:|........|.|           |.     .|
Mouse   493 FRKWTLSTAAQTHRLRRLRGPAKCRECEAFMVSGTECEECFLTCHKRCLETLLILCGH-----RR 552

  Fly   258 LVAWMNLSNWFKSRPSVETLREQRIFFDEPCFDTELEMVLKHDQHRTVPRIVVDCCDLIEQKYRR 322
            |.|.|:|.       .|:.|:..|.|.:|                  ||.::..|...||.:   
Mouse   553 LPARMSLF-------GVDFLQLPRDFPEE------------------VPFVITRCTAEIEHR--- 589

  Fly   323 STQPIEGIYRQCGDYNKIQTLRFSIDANDYDSLRQPDVDIHTLTGVLKLFLREIKSPLVRVNEAK 387
             ...::||||..|...:::.|..:.: |....:.......|.:|.|||.||:|:..|:|..:...
Mouse   590 -ALGLQGIYRVSGSRVRVERLCQAFE-NGRALVELSGNSPHDITSVLKRFLQELTDPVVPFHLYD 652

  Fly   388 TFI--------------GQPNQWLLTDLSAK-LDSLKRLIRSLPESNRDTMDYIFGHFNRI-TKV 436
            .||              |.||.      |.: :.|||.|:..||:||..|:.::..|..|: .:.
Mouse   653 AFISLAKTLHADPGDDPGTPNP------SPEIIRSLKTLLVQLPDSNYSTLRHLVAHLFRVAARF 711

  Fly   437 PLQQISAETLSISVTPSIFHTV--PQGVHMQDIQQLLREGETLADCVKLMIEYQGRIF--DRL-- 495
            ...::||..|.|...|::....  |:......:..||..|.. |..|:.:|.:..:||  |.|  
Mouse   712 EENKMSANNLGIVFGPTLLRPPDGPRATGASPVACLLDSGHQ-AQLVEFLIVHYEQIFGMDELPL 775

  Fly   496 ---RLIQTAHLLCRCVERFANHSKSEILNPKPNTPLYLPHLYTHSRFAPESVSNPDH 549
               .|.|...|...|:|....|..|  |..:...||.:         |.:|..:|.|
Mouse   776 ASEPLTQDPGLAPACLESSPQHPAS--LLAQDTQPLTI---------ALDSSPDPKH 821

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP16FNP_001285400.1 RhoGAP 306..487 CDD:238090 50/198 (25%)
GmipXP_030099716.1 BAR 124..324 CDD:472257
C1_GMIP-like 503..552 CDD:410366 7/53 (13%)
RhoGAP 560..763 CDD:470621 56/239 (23%)
Blue background indicates that the domain is not in the aligned region.

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