DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP16F and arhgap27l

DIOPT Version :9

Sequence 1:NP_001285400.1 Gene:RhoGAP16F / 32790 FlyBaseID:FBgn0030893 Length:581 Species:Drosophila melanogaster
Sequence 2:XP_694888.4 Gene:arhgap27l / 566523 ZFINID:ZDB-GENE-120406-11 Length:1014 Species:Danio rerio


Alignment Length:551 Identity:128/551 - (23%)
Similarity:222/551 - (40%) Gaps:160/551 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 QTTTSQRPVTPGTPDSAHIVIGAAGFVAHERRQPGKTLMNCFR---------------------- 44
            |.|..:..|.||.|.:.:.|           .|.|..::|.:|                      
Zfish   537 QWTLPEASVPPGQPMNGNGV-----------EQDGPPVLNNWRYTQFNISQEDLKFSPSHRRIAS 590

  Fly    45 DRSTTSSSSS---QAQH---AYVRGHSVTS-STLFRLEGSGGSNCTLDKAGKQDTGRPEAVVLLR 102
            |.::.:|||.   ::||   .:.|..:::| ||     .|...:.:|:|||           :|.
Zfish   591 DNASDASSSGNSPESQHYDKKFRRRRNLSSYST-----DSHSHHSSLEKAG-----------ILN 639

  Fly   103 ELKTRPNKLALLKSSSSK-----DLTRLFLDD--------STNTAVLVSNTSIDVCSSNSSSGGS 154
            :.|...|...|.|:.:..     |....|..|        |:.|..:|...::::       .|:
Zfish   640 KTKVAENGKRLRKNWAQSWTVLHDGVLTFHKDPKFAPAGMSSKTNQIVPEYTVEL-------KGA 697

  Fly   155 PAVGRSKSGRDRRNGLECCSSCSKRWHDLKQRMHTLE--------------QDLLVQTTYSQELE 205
            .....||....::|.||           ||.| |..|              |.:::.|.   :|.
Zfish   698 TLSWASKEKSSKKNVLE-----------LKTR-HGSEYLIQYDTDSIIQDWQKIILDTI---KLL 747

  Fly   206 QKVGEMSRQLTELLQER-----DRERDKDKARFAAAGGVAAPGKRTAHGSPNVRPSRLVAWMNLS 265
            .:.|..|....|.:.|:     |:|:..:.||.::...:.....|       ||       ..|.
Zfish   748 HEHGHNSEDEAEDVPEKSPLPADKEKKPEAARLSSTSSIDTDQGR-------VR-------TKLR 798

  Fly   266 NWFKSRPSVETLREQRIFFDEPCFDTELEMVLKHDQHRTVPRIVVDCCDLIEQKYRRSTQPIEGI 330
            .:.:.||::::::|:. :..|..|...|: .|.|.::.|||:.|..|...:|::..:    |:||
Zfish   799 KFLQRRPTLQSVKEKG-YIKENVFGCHLD-TLCHRENTTVPKFVEKCIRSVEKRGLK----IDGI 857

  Fly   331 YRQCGDYNKIQTLRFSIDANDYDSLRQPDVD--------IHTLTGVLKLFLREIKSPLVRVNEAK 387
            ||..|:...||.||:..|       .:.|:|        ||.:||.|||||||:..||...:...
Zfish   858 YRVSGNLAVIQKLRYKAD-------HEEDLDLEDGQWEEIHVITGALKLFLRELPEPLFPFSFFD 915

  Fly   388 TFIGQPNQWLLTDLSAKLDSLKRLIRSLPESNRDTMDYIFGHFNRITK-VPLQQISAETLSISVT 451
            .||....   ::|.|.|:..::.|:|:||..|.|||:.:|.|..::.: ..:.::|.::.:|...
Zfish   916 KFIAAIQ---ISDYSQKVSYIRDLVRNLPLPNHDTMEVLFRHLRKVIEHGEMNRMSVQSTAIVFG 977

  Fly   452 PSIFHTVPQ-----GVHM----QDIQQLLRE 473
            |::..  ||     .:||    |.::.:|.|
Zfish   978 PTLLR--PQEESNITMHMVFQNQIVELVLNE 1006

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP16FNP_001285400.1 RhoGAP 306..487 CDD:238090 55/186 (30%)
arhgap27lXP_694888.4 SH3_ARHGAP27 15..71 CDD:213002
WW 340..368 CDD:278809
WW 394..422 CDD:278809
PH 632..745 CDD:278594 28/145 (19%)
PH_ARHGAP9-like 633..744 CDD:270053 26/140 (19%)
RhoGAP_ARHGAP27_15_12_9 821..1006 CDD:239868 60/201 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592294
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1450
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000816
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23176
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1079
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.930

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