DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP16F and arhgap27l

DIOPT Version :10

Sequence 1:NP_001285400.1 Gene:RhoGAP16F / 32790 FlyBaseID:FBgn0030893 Length:581 Species:Drosophila melanogaster
Sequence 2:XP_694888.5 Gene:arhgap27l / 566523 ZFINID:ZDB-GENE-120406-11 Length:1014 Species:Danio rerio


Alignment Length:551 Identity:128/551 - (23%)
Similarity:222/551 - (40%) Gaps:160/551 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 QTTTSQRPVTPGTPDSAHIVIGAAGFVAHERRQPGKTLMNCFR---------------------- 44
            |.|..:..|.||.|.:.:.|           .|.|..::|.:|                      
Zfish   537 QWTLPEALVPPGQPMNGNGV-----------EQDGPPVLNNWRYTQFNISQEDLKFSPSHRRIAS 590

  Fly    45 DRSTTSSSSS---QAQH---AYVRGHSVTS-STLFRLEGSGGSNCTLDKAGKQDTGRPEAVVLLR 102
            |.::.:|||.   ::||   .:.|..:::| ||     .|...:.:|:|||           :|.
Zfish   591 DNASDASSSGNSPESQHYDKKFRRRRNLSSYST-----DSHSHHSSLEKAG-----------ILN 639

  Fly   103 ELKTRPNKLALLKSSSSK-----DLTRLFLDD--------STNTAVLVSNTSIDVCSSNSSSGGS 154
            :.|...|...|.|:.:..     |....|..|        |:.|..:|...::::       .|:
Zfish   640 KTKVAENGKRLRKNWAQSWTVLHDGVLTFHKDPKFAPAGMSSKTNQIVPEYTVEL-------KGA 697

  Fly   155 PAVGRSKSGRDRRNGLECCSSCSKRWHDLKQRMHTLE--------------QDLLVQTTYSQELE 205
            .....||....::|.||           ||.| |..|              |.:::.|.   :|.
Zfish   698 TLSWASKEKSSKKNVLE-----------LKTR-HGSEYLIQYDTDSIIQDWQKIILDTI---KLL 747

  Fly   206 QKVGEMSRQLTELLQER-----DRERDKDKARFAAAGGVAAPGKRTAHGSPNVRPSRLVAWMNLS 265
            .:.|..|....|.:.|:     |:|:..:.||.::...:.....|       ||       ..|.
Zfish   748 HEHGHNSEDEAEDVPEKSPLPADKEKKPEAARLSSTSSIDTDQGR-------VR-------TKLR 798

  Fly   266 NWFKSRPSVETLREQRIFFDEPCFDTELEMVLKHDQHRTVPRIVVDCCDLIEQKYRRSTQPIEGI 330
            .:.:.||::::::|:. :..|..|...|: .|.|.::.|||:.|..|...:|::..:    |:||
Zfish   799 KFLQRRPTLQSVKEKG-YIKENVFGCHLD-TLCHRENTTVPKFVEKCIRSVEKRGLK----IDGI 857

  Fly   331 YRQCGDYNKIQTLRFSIDANDYDSLRQPDVD--------IHTLTGVLKLFLREIKSPLVRVNEAK 387
            ||..|:...||.||:..|       .:.|:|        ||.:||.|||||||:..||...:...
Zfish   858 YRVSGNLAVIQKLRYKAD-------HEEDLDLEDGQWEEIHVITGALKLFLRELPEPLFPFSFFD 915

  Fly   388 TFIGQPNQWLLTDLSAKLDSLKRLIRSLPESNRDTMDYIFGHFNRITK-VPLQQISAETLSISVT 451
            .||....   ::|.|.|:..::.|:|:||..|.|||:.:|.|..::.: ..:.::|.::.:|...
Zfish   916 KFIAAIQ---ISDYSQKVSYIRDLVRNLPLPNHDTMEVLFRHLRKVIEHGEMNRMSVQSTAIVFG 977

  Fly   452 PSIFHTVPQ-----GVHM----QDIQQLLRE 473
            |::..  ||     .:||    |.::.:|.|
Zfish   978 PTLLR--PQEESNITMHMVFQNQIVELVLNE 1006

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP16FNP_001285400.1 RhoGAP 306..487 CDD:238090 55/186 (30%)
arhgap27lXP_694888.5 None

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