DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP16F and arhgap12a

DIOPT Version :10

Sequence 1:NP_001285400.1 Gene:RhoGAP16F / 32790 FlyBaseID:FBgn0030893 Length:581 Species:Drosophila melanogaster
Sequence 2:XP_021336423.1 Gene:arhgap12a / 563267 ZFINID:ZDB-GENE-050809-38 Length:853 Species:Danio rerio


Alignment Length:371 Identity:88/371 - (23%)
Similarity:163/371 - (43%) Gaps:67/371 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 NSSSGGSPAVGRSKSGRDRRNGLEC---CSSCSKRW--HDLKQRMHTLE------QDLLVQT--- 198
            |...||    |....|||:::.:|.   ....|..|  .|...:.|.||      .:||:|:   
Zfish   506 NKGQGG----GSGWFGRDQKSSVEYSVDLKGGSVDWASKDKSSKKHVLELKTRQGTELLLQSDSD 566

  Fly   199 ---------------TYSQELEQKVGEMSRQLTELLQERDRERDKDKARFAAAGGVAAPGKRTA- 247
                           ||..|.::.:.|   .:.|..:....:::||:.....|..:    |:|| 
Zfish   567 GLVNDWHKALTEAIHTYMWESDEAIEE---DMPESPENEKHDKEKDRKNSKKARDI----KKTAS 624

  Fly   248 -HGSPNVRPSRLVAWMNLSNWFKSRPSVETLREQRIFFDEPCFDTELEMVLKHDQHRTVPRIVVD 311
             ..:...:.::||..:      ..||:::.::::....|: .|...|..:.:. ::.||||.|..
Zfish   625 MDNAEQKKKNKLVVLL------LGRPTLQAVKDKGYIKDQ-VFGCSLSSLCQR-ENSTVPRFVWL 681

  Fly   312 CCDLIEQKYRRSTQPIEGIYRQCGDYNKIQTLRFSIDANDYDSLRQPD-VDIHTLTGVLKLFLRE 375
            |.:.:|    ::...::|:||..|:...||.|||:::..:...|.... .|||..||.||:|.||
Zfish   682 CIEQVE----KNGLGVDGLYRVSGNLAIIQKLRFAVNHEEKIDLGDSKWEDIHVTTGALKMFFRE 742

  Fly   376 IKSPLVRVNEAKTFIGQPNQWLLTDLSAKLDSLKRLIRSLPESNRDTMDYIFGHFNRITK-VPLQ 439
            :..||........||....   :.|...|:.::|.|::.||..|.||:..:|.|..::.: |...
Zfish   743 LPEPLFTYTFFSDFISAIK---MPDYKQKVQTVKDLMKKLPRPNHDTIQVLFKHLKKVIQHVDEN 804

  Fly   440 QISAETLSISVTPSI----FHTVPQGVHM----QDIQQLLREGETL 477
            :::.::::|...|::    ..|....|||    |.::.:|.|.:|:
Zfish   805 RMTTQSVAIVFGPTLLRPEIETANMAVHMVYQNQIVELILMEYDTI 850

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP16FNP_001285400.1 RhoGAP 306..487 CDD:238090 51/182 (28%)
arhgap12aXP_021336423.1 SH3_ARHGAP12 11..70 CDD:213003
SH3-WW_linker 67..233 CDD:435468
WW 252..278 CDD:459800
PRP40 253..>331 CDD:227435
PH_ARHGAP9-like 470..580 CDD:270053 17/77 (22%)
RhoGAP_ARHGAP27_15_12_9 660..846 CDD:239868 53/193 (27%)
Blue background indicates that the domain is not in the aligned region.

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