DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP16F and arhgap12b

DIOPT Version :10

Sequence 1:NP_001285400.1 Gene:RhoGAP16F / 32790 FlyBaseID:FBgn0030893 Length:581 Species:Drosophila melanogaster
Sequence 2:XP_073773592.1 Gene:arhgap12b / 393848 ZFINID:ZDB-GENE-040426-1727 Length:893 Species:Danio rerio


Alignment Length:471 Identity:111/471 - (23%)
Similarity:195/471 - (41%) Gaps:122/471 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 SSTLF-RLEGSG--GSNCTLDKAGKQDTGRPEAVVLL-----RELKTRPNKLALLKSSSSKDLTR 124
            ||.|| :.:|||  .|.|       .:...||.::.|     |.:|.||                
Zfish   501 SSLLFAKGQGSGTSWSYC-------HNGSFPELLLSLLSNWKRSIKPRP---------------- 542

  Fly   125 LFLDDSTNTAVLVSNTSIDVC--SSNSSSGGSPAVGRSKSGRDRRNG-LECCS---SCSKRWHDL 183
                       .||.|.   |  :..||.||:.:  :.:...|.|.| :|..|   |..|...:|
Zfish   543 -----------AVSYTH---CRRARASSFGGNQS--KPEFTVDLRGGSVEWASKEKSSKKHVIEL 591

  Fly   184 KQRMHTLEQDLLVQTTYSQELEQKVGEMSRQLTELL---------------------QERDRE-- 225
            |.|:.|   :||:|:    |::..:.:..|.|:|.:                     ::.|:|  
Zfish   592 KTRVGT---ELLIQS----EIDSVINDWFRALSETINTHAWESDEAIEEDMPESPGSEKHDKEKD 649

  Fly   226 -RDKDKARFAAAGGVAAPGKRTAHGSPNVRPSRLVAWMNLSNWFKSRPSVETLREQRIFFDEPCF 289
             ||..|.|..         |.::..|...:.:|    :.|..:...||:::.:|::....|: .|
Zfish   650 PRDSKKNRVV---------KNSSMESSEQKKTR----VKLKKFLTRRPTLQAVRDKGYIKDQ-VF 700

  Fly   290 DTELEMVLKHDQHRTVPRIVVDCCDLIEQKYRRSTQPIEGIYRQCGDYNKIQTLRFSIDANDYDS 354
            ...|..:.:. :..:||..|..|.:.:|    .:...::|:||..|:...||.|||:::.::..:
Zfish   701 GCSLTALCQR-EGTSVPNFVKMCIEHVE----NTGLNVDGLYRVSGNLAVIQKLRFAVNHDEKVN 760

  Fly   355 LRQPD-VDIHTLTGVLKLFLREIKSPLVRVNEAKTFIGQPNQWLLTDLSAKLDSLKRLIRSLPES 418
            |.... .|||..||.||:..||:..||........|:.....   :|...::.|:|.||:.||:.
Zfish   761 LDDSKWEDIHVTTGALKMLFRELPEPLFTYASFNDFVEAIKN---SDYKQRVQSIKDLIKQLPKP 822

  Fly   419 NRDTMDYIFGHFNR-ITKVPLQQISAETLSISVTPSI----FHTVPQGVHMQDIQQLLREGETLA 478
            |::||..:|.|..| |....:.:::.::::|...|::    ..|....|||....|::.      
Zfish   823 NQETMKVLFKHLKRVIDHGEVNRMTTQSVAIVFGPTLLRPEIETGNMAVHMVYQNQIVE------ 881

  Fly   479 DCVKLMIEYQGRIFDR 494
               .:::||: .||.|
Zfish   882 ---LILLEYE-NIFGR 893

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP16FNP_001285400.1 RhoGAP 306..487 CDD:238090 47/186 (25%)
arhgap12bXP_073773592.1 None

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