DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP16F and RhoGAP18B

DIOPT Version :9

Sequence 1:NP_001285400.1 Gene:RhoGAP16F / 32790 FlyBaseID:FBgn0030893 Length:581 Species:Drosophila melanogaster
Sequence 2:NP_573352.2 Gene:RhoGAP18B / 32898 FlyBaseID:FBgn0261461 Length:1317 Species:Drosophila melanogaster


Alignment Length:554 Identity:120/554 - (21%)
Similarity:193/554 - (34%) Gaps:167/554 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 SSSQAQHAYVRGHSVTSSTLFRLEGSGGSNCTLDKAGKQDTGRPE------------AVVLLREL 104
            |..:|......|.:||:||     .:.||   :...|...||:|:            :||:...|
  Fly   823 SKEEADETLSLGSTVTNST-----ATLGS---ISSTGSSVTGQPKDTPKDLPADQQPSVVVHPIL 879

  Fly   105 KTRPNKLALLKSSSSKDLTRLFLD-------------------------DSTNTAVLVSNTSIDV 144
            :   |..........|..:.:|.|                         .::||..|...:....
  Fly   880 R---NICIFYSQKDPKKYSAIFYDYHLSLVHQRFMTRIRRPAPPPPAQLATSNTTSLAPRSDDSG 941

  Fly   145 CSSNSSS----------------------------------GGSPAVGRSKSGRDRRNGLECCSS 175
            ||..:..                                  |.:|..||..  |.|.|.....:.
  Fly   942 CSCEAEDSYNHQHNPTPAIPKPLKEEWERAVLAAGAVAGKRGVAPRTGRKL--RVRSNARLLLTD 1004

  Fly   176 CSKRWHDLKQRMHTL--EQDLLVQTT---YSQELEQKVGEMSRQLTELLQ--------------- 220
            ....|.:..|.::..  |:|::|..|   .:|::::.......|.:.:||               
  Fly  1005 SVLAWRETLQDVNCCEDEEDMIVPVTDILRAQQIQEDNEVQQTQQSTILQRYKSVSIGNLLDLPG 1069

  Fly   221 ERDRERDKDKARFAAAGGVAAPGKRTAHGSPNVRPSRLVAWMNLSNWFKSRPSVETLREQR---- 281
            |.|::..|::.|...|                         :| ||.|:...|.::.::.|    
  Fly  1070 EDDKKSIKNRMRMKFA-------------------------VN-SNVFRINRSPKSEKKSRSRRG 1108

  Fly   282 ----IFFDE---PCFDTELE-MVLKHDQHRTVPRIVVDCCDLIEQKYRRSTQPIE--GIYRQCGD 336
                ::.||   |.|...|. :.|....|..|||.|||.|..|||     .:.||  |:||..|:
  Fly  1109 QVNSLYLDEQKYPLFAAPLSALELNMTDHPNVPRFVVDVCAYIEQ-----PECIEQDGLYRASGN 1168

  Fly   337 YNKIQTLRFSIDANDYDSLRQPDVDIHTLTGVLKLFLREIKSPLVRVNEAKTFIGQPNQWLLTDL 401
            ...:..||..: .:.||.......||||||.:.|.|.||:.|||: ..||...:|:.    |.| 
  Fly  1169 KVLVDELRKKL-THVYDPRWLKTDDIHTLTSLHKQFFRELTSPLI-TQEAYERLGRS----LND- 1226

  Fly   402 SAKLDSLKRLIRSLPESNRDTMDYIFGHFNRITKVPLQQISAETLSISVTPSIFHTVPQGVHMQD 466
            .|.::.:......:||.||.|:.::..|..|:         |...:.:..||....:..|..:..
  Fly  1227 DAAIERMSLAFDDMPEPNRSTLRFLIRHLTRV---------AAASASNRMPSTNLAIVWGPCLLS 1282

  Fly   467 IQQLLREGETLADCVKLMIEYQGRIF--DRLRLI 498
            ..|:..:...:....|::||...|||  |..||:
  Fly  1283 ANQIQLDIGRMNMLAKVLIENYDRIFHPDNERLV 1316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP16FNP_001285400.1 RhoGAP 306..487 CDD:238090 52/182 (29%)
RhoGAP18BNP_573352.2 RhoGAP 1141..1289 CDD:279014 50/168 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000816
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23176
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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