DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP16F and rga7

DIOPT Version :10

Sequence 1:NP_001285400.1 Gene:RhoGAP16F / 32790 FlyBaseID:FBgn0030893 Length:581 Species:Drosophila melanogaster
Sequence 2:NP_595866.1 Gene:rga7 / 2540635 PomBaseID:SPBC23G7.08C Length:695 Species:Schizosaccharomyces pombe


Alignment Length:211 Identity:54/211 - (25%)
Similarity:99/211 - (46%) Gaps:27/211 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   289 FDTELEMVLKHDQHRTVPRIVVDCCDLIEQKYRRSTQPIEGIYRQCGDYNKIQTLRFSIDANDYD 353
            |...|:.::.. :|..:|.||:.|...:|    .....::||||......::..||...:.|...
pombe   504 FGARLDAIILR-EHSNIPNIVMQCTSQVE----NFGLNLQGIYRVPSSSARVNMLRSQFENNPLL 563

  Fly   354 SLRQP---DVDIHTLTGVLKLFLREIKSPLVRVNEAKTFIGQPNQWLLTDLSAKLDSLKRLIRSL 415
            .|..|   :.|:|.:..:||:|.||::.||:..|..:.||...|   :.|.|.:.|::.|.|..|
pombe   564 QLHTPEDYENDVHAVADLLKIFFRELREPLIPDNHQRDFIDAGN---VEDESRRRDAVHRAINDL 625

  Fly   416 PESNRDTMDYIFGHFNRITK-VPLQQISAETLSISVTPSIFH--TVPQGVHMQDIQQLLREGETL 477
            |::|..|:.::..|..:|.: ..:.::|...|:|...|:|..  |:|             |..:.
pombe   626 PDANYSTIRHLTIHLAKIKENSDVNKMSTNNLAIIWGPTIIKQATIP-------------EISSF 677

  Fly   478 ADCVKLMIEYQGRIFD 493
            :..::::|:|...|||
pombe   678 SRTIEILIDYCFTIFD 693

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP16FNP_001285400.1 RhoGAP 306..487 CDD:238090 47/186 (25%)
rga7NP_595866.1 F-BAR_Rgd1 39..277 CDD:153336
Herpes_BLLF1 <321..>479 CDD:282904
RhoGAP_fRGD1 504..692 CDD:239863 51/208 (25%)
Blue background indicates that the domain is not in the aligned region.

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