DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP16F and arhgap9

DIOPT Version :9

Sequence 1:NP_001285400.1 Gene:RhoGAP16F / 32790 FlyBaseID:FBgn0030893 Length:581 Species:Drosophila melanogaster
Sequence 2:XP_005172184.2 Gene:arhgap9 / 100334461 ZFINID:ZDB-GENE-110510-2 Length:855 Species:Danio rerio


Alignment Length:531 Identity:121/531 - (22%)
Similarity:215/531 - (40%) Gaps:107/531 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 TPDSAHIVIGAAGFVAHERRQPGKTLMNCFRDRSTTSSSSSQAQHAY---VRGHSVTSSTLFRLE 75
            :||.::|...|.|:...:..|           |:.:|.:.|.|...:   .|.:|..|..:..:.
Zfish   351 SPDLSYISHDANGWQLSQSMQ-----------RAASSDALSSASSMFDDTPRRNSALSGGMAHIS 404

  Fly    76 GS-------------GGSNCTLDKAGKQDTGRPEAVVLLRELKTRPNKLALL-KSSSSKDLTRLF 126
            .|             |.|:..:..........|::..:..||:    |..|| |:..::...:|.
Zfish   405 HSYSMILPSQRTATNGQSDYRVVVEPPSSDSSPDSEGVTPELE----KAGLLNKTKIAEGGRKLR 465

  Fly   127 LDDSTNTAVLVSNTSI---DVCSSNSSSGGSPAVGRSKSGRDRRNG-LECCSSCSKRWHDLKQRM 187
            .:.:.:..|||.|:.:   |..|.|..| ..|...|.:|..|.|.. |:..:..|.:.:..|.|.
Zfish   466 KNWNPSWVVLVGNSLVFFKDPKSQNPES-WKPGNSRPESSVDLRGAQLQWANDLSSKKNVFKLRT 529

  Fly   188 HTLEQDLLVQTTYSQELEQKVGEMSRQLTELLQERDRER-----------------------DKD 229
            .|..:.||     ..|.:..:.|..|.:..::...|:|.                       |:|
Zfish   530 ITGNEFLL-----QSETDSLIREWYRTIQNVIDRLDKENPLDNVLLYSLRRAGSVELLDHSGDED 589

  Fly   230 KARFAAAGGVAAPGKRTAHGSPNVRPSRLVAWMNLSNWFKSRPSVETLREQRIFFDEPCFDTELE 294
            :.|    ||:.|...|:.....|....|:.:  .|......||.::||:|:.:..|: .|...||
Zfish   590 EVR----GGIKASLPRSTSNLENSEHKRVKS--RLKKLILRRPPLQTLQEKGLIKDQ-VFGCSLE 647

  Fly   295 MVLKHDQHRTVPRIVVDCCDLIEQKYRRSTQPIEGIYRQCGDYNKIQTLRFSID----------- 348
            ::.:.:: .|||:.|..|.:.:|:|...:    :||||..|:...||.|||:::           
Zfish   648 LLCEREK-CTVPQFVRKCTEAVERKGLET----DGIYRVSGNLAVIQKLRFAVNHERAVTTDGRY 707

  Fly   349 ------ANDYDSLRQPD-VDIHTLTGVLKLFLREIKSPLVRVNEAKTFIGQPNQWLLTDLSAKLD 406
                  ..:...|..|. .|||.:||.||||.||:..|||..:....|:   :...:.|...:::
Zfish   708 LFPEALVQERLDLDDPQWEDIHVITGALKLFFRELPEPLVPFSAFHDFV---DSIKIADHLERVE 769

  Fly   407 SLKRLIRSLPESNRDTMDYIFGHFNRI-TKVPLQQISAETLSISVTPSIFHTVPQGVHM------ 464
            .||.|:.|||.:|:.|:.::..|..|: .:....::|.:.:.|...|::.....:..:|      
Zfish   770 RLKMLVLSLPPANQHTLQHMIRHLRRVMERSDSNRMSTQNIGIVFGPTLMRPENESGNMAFNMVY 834

  Fly   465 --QDIQQLLRE 473
              |.|:.||.:
Zfish   835 QNQAIETLLSQ 845

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP16FNP_001285400.1 RhoGAP 306..487 CDD:238090 51/195 (26%)
arhgap9XP_005172184.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000816
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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