DRSC/TRiP Functional Genomics Resources

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Protein Alignment scu and kduD

DIOPT Version :9

Sequence 1:NP_523396.1 Gene:scu / 32789 FlyBaseID:FBgn0021765 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_417319.1 Gene:kduD / 947323 ECOCYCID:EG12361 Length:253 Species:Escherichia coli


Alignment Length:255 Identity:73/255 - (28%)
Similarity:123/255 - (48%) Gaps:21/255 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 IKNAVSLVTGGASGLGRATAERLAKQGASVILADL--PSSKGNEVAKELGDKVVFVPVDVTSEKD 64
            ::..|::|||..:|||:..|..||:.|..::..::  |:....:|. .||.:.:.:..|:.....
E. coli     8 LEGKVAVVTGCDTGLGQGMALGLAQAGCDIVGINIVEPTETIEQVT-ALGRRFLSLTADLRKIDG 71

  Fly    65 VSAALQTAKDKFGRLDLTVNCAGTATAVKTFNFNKNVAHRLEDFQRVININTVGTFNVIRLSAGL 129
            :.|.|..|..:||.:|:.||.||.........|::      :|:..|:|:|....|.:.:.:|..
E. coli    72 IPALLDRAVAEFGHIDILVNNAGLIRREDALEFSE------KDWDDVMNLNIKSVFFMSQAAAKH 130

  Fly   130 MGANEPNQDGQRGVIVNTASVAAFDGQIGQAAYSASKAAVVGMTLPIARDLSTQGIRICTIAPGL 194
            ..|     .|..|.|:|.||:.:|.|.|...:|:|||:.|:|:|..:|.:.:...|.:..||||.
E. coli   131 FIA-----QGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGY 190

  Fly   195 F---NTPMLAALPEKVRTFLAKSIPFPQRLGEPSEYAH--LVQAIYENPLLNGEVIRIDG 249
            .   ||..|.|..::....|.: || ..|.|.||:...  :..|...:..:||..|.:||
E. coli   191 MATNNTQQLRADEQRSAEILDR-IP-AGRWGLPSDLMGPIVFLASSASDYVNGYTIAVDG 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scuNP_523396.1 HSD10-like_SDR_c 3..255 CDD:187629 73/254 (29%)
kduDNP_417319.1 PRK08993 1..253 CDD:181605 73/255 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
10.910

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