DRSC/TRiP Functional Genomics Resources

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Protein Alignment scu and ucpA

DIOPT Version :9

Sequence 1:NP_523396.1 Gene:scu / 32789 FlyBaseID:FBgn0021765 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_416921.4 Gene:ucpA / 946898 ECOCYCID:EG12133 Length:263 Species:Escherichia coli


Alignment Length:260 Identity:89/260 - (34%)
Similarity:132/260 - (50%) Gaps:34/260 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SLVTGGASGLGRATAERLAKQGASVILADLPSSKGNEVAKEL---GDKVVFVPVDVTSEKDVSAA 68
            :|:||...|:|...|...|:.||::||.|: |.:..::|.||   |.:...|..||.....|:||
E. coli     9 ALITGALQGIGEGIARTFARHGANLILLDI-SPEIEKLADELCGRGHRCTAVVADVRDPASVAAA 72

  Fly    69 LQTAKDKFGRLDLTVNCAGTATAVKTFNFNKNVAHRLEDFQRVININTVGTFNVIRLSAGLMGAN 133
            ::.||:|.||:|:.||.||........:.:.:.    .||.  |:||..|.:||.:.....|.| 
E. coli    73 IKRAKEKEGRIDILVNNAGVCRLGSFLDMSDDD----RDFH--IDINIKGVWNVTKAVLPEMIA- 130

  Fly   134 EPNQDGQRGVIVNTASVAAFDGQI----GQAAYSASKAAVVGMTLPIARDLSTQGIRICTIAPGL 194
              .:||:   ||..:||.   |.:    |:.||:.:|||:||:|..:|.:.:..|||:..|.||.
E. coli   131 --RKDGR---IVMMSSVT---GDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGY 187

  Fly   195 FNTPMLAAL--------PEKVRTFLAKSIPFPQRLGEPSEYAHLVQ--AIYENPLLNGEVIRIDG 249
            ..|||..::        ||.|.|.:||:||. :||.:|.|...|..  |..|:..|.|....|||
E. coli   188 VRTPMAESIARQSNPEDPESVLTEMAKAIPM-RRLADPLEVGELAAFLASDESSYLTGTQNVIDG 251

  Fly   250  249
            E. coli   252  251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scuNP_523396.1 HSD10-like_SDR_c 3..255 CDD:187629 89/260 (34%)
ucpANP_416921.4 PRK08226 1..263 CDD:181305 89/260 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
10.910

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