DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment scu and AT4G03140

DIOPT Version :9

Sequence 1:NP_523396.1 Gene:scu / 32789 FlyBaseID:FBgn0021765 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_567251.2 Gene:AT4G03140 / 828065 AraportID:AT4G03140 Length:343 Species:Arabidopsis thaliana


Alignment Length:266 Identity:82/266 - (30%)
Similarity:127/266 - (47%) Gaps:35/266 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 IKNAVSLVTGGASGLGRATAERLAKQGASVILADLPSSKGNEVAKELGDKVVFVPVDVTSEKDVS 66
            ::..|:|:||||||:|:|||.:....||.||:||:....|.|..:|||....:.|.|||.|.|::
plant    78 LEGKVALITGGASGIGKATAGKFISHGAKVIIADIQPQIGRETEQELGPSCAYFPCDVTKESDIA 142

  Fly    67 AALQTAKDKFGRLDLTVNCAG--TATAVKTFNFNKNVAHRLEDFQRVININTVGTFNVIRLSAGL 129
            .|:..|.....:||:..|.||  ..|.....:.:.||      |.:|||.|..|....|:.:|.:
plant   143 NAVDFAVSLHTKLDIMYNNAGIPCKTPPSIVDLDLNV------FDKVINTNVRGVMAGIKHAARV 201

  Fly   130 MGANEPNQDGQRGVIVNTASVAAFDGQIGQAAYSASKAAVVGMTLPIARDLSTQGIRICTIAPGL 194
            |   .|...|.   |:...||....|.:.|..||.||:||:|:....|.:|....||:..|:|..
plant   202 M---IPRNSGS---IICAGSVTGMMGGLAQHTYSVSKSAVIGIVRSTASELCKHRIRVNCISPFA 260

  Fly   195 FNTPMLAALPEKVRTFL-----AKSIPFPQRLG-------EPSEYAHLVQAIY----ENPLLNGE 243
            ..|..:.   :::|...     ::.|...|..|       ||::.|:  .|:|    ::..:||.
plant   261 ITTSFVM---DEMRQIYPGVDDSRLIQIVQSTGVLNGEVCEPTDVAN--AAVYLASDDSKYVNGH 320

  Fly   244 VIRIDG 249
            .:.:||
plant   321 NLVVDG 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scuNP_523396.1 HSD10-like_SDR_c 3..255 CDD:187629 82/265 (31%)
AT4G03140NP_567251.2 PLN02253 77..331 CDD:177895 82/266 (31%)
NADB_Rossmann 77..329 CDD:304358 82/266 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 112 1.000 Domainoid score I2058
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 122 1.000 Inparanoid score I1969
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1074094at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm3543
orthoMCL 1 0.900 - - OOG6_102935
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
87.830

Return to query results.
Submit another query.