DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment scu and hsd17b8

DIOPT Version :9

Sequence 1:NP_523396.1 Gene:scu / 32789 FlyBaseID:FBgn0021765 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_001005292.2 Gene:hsd17b8 / 64815 ZFINID:ZDB-GENE-010110-1 Length:256 Species:Danio rerio


Alignment Length:255 Identity:85/255 - (33%)
Similarity:128/255 - (50%) Gaps:21/255 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VSLVTGGASGLGRATAERLAKQGASVILADLPSSKGNEVAKEL-----GDKVVFVPVDVTSEKDV 65
            ::|||||.||:|||..:|.|.:||||::||......|:..:.|     |.:.:.:.|||:|:..|
Zfish    11 LTLVTGGGSGIGRAVCQRFATEGASVVVADRNEESANQTLELLPREHRGQEHMALGVDVSSKDSV 75

  Fly    66 SAALQTAKDK-FGRLDLTVNCAGTATAVKTFNFNKNVAHRLEDFQRVININTVGTFNVIR-LSAG 128
            ...:.:.:.: |....:.||.||...........:      :||.:||.:|..|||.|.: :|..
Zfish    76 EKLVTSIQRRYFQPPSVCVNAAGITQDEFILKMEE------DDFDKVIKVNLKGTFLVTQAVSKA 134

  Fly   129 LMGANEPNQDGQRGVIVNTASVAAFDGQIGQAAYSASKAAVVGMTLPIARDLSTQGIRICTIAPG 193
            |:.|.     ..:|.|:...|:....|.|||..|::|||.|.|:|...|::||..|||...:.||
Zfish   135 LVSAG-----SAKGSIITVGSIVGKVGNIGQVNYASSKAGVQGLTRTAAKELSKFGIRCNCVLPG 194

  Fly   194 LFNTPMLAALPEKVRTFLAKSIPFPQRLGEPSEYAHLVQ--AIYENPLLNGEVIRIDGAL 251
            ...|||...:||||...:...||. .|:|||:|.|....  |..::..:.|..|.:.|.|
Zfish   195 FITTPMTDKVPEKVIDKITSIIPL-GRMGEPAEVADACAFLASDDSRYITGVSIEVAGGL 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scuNP_523396.1 HSD10-like_SDR_c 3..255 CDD:187629 85/255 (33%)
hsd17b8NP_001005292.2 BKR_SDR_c 10..254 CDD:187594 85/255 (33%)
fabG 13..254 CDD:235546 85/253 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.