DRSC/TRiP Functional Genomics Resources

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Protein Alignment scu and Mfe2

DIOPT Version :9

Sequence 1:NP_523396.1 Gene:scu / 32789 FlyBaseID:FBgn0021765 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_001285318.1 Gene:Mfe2 / 32582 FlyBaseID:FBgn0030731 Length:598 Species:Drosophila melanogaster


Alignment Length:238 Identity:62/238 - (26%)
Similarity:101/238 - (42%) Gaps:63/238 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VSLVTGGASGLGRATAERLAKQGASVILADLPSSKG-------------NEVAKELGDKVVFVPV 57
            |::|||..:||||..|...|::||.|::.||..:..             :|:.|..|:.|    .
  Fly    14 VAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAV----A 74

  Fly    58 DVTSEKDVSAALQTAKDKFGRLDLTVNCAG---TATAVKTFNFNKNVAHRLEDFQRVININTVGT 119
            |..|..|.:..::||...|||:|:.||.||   ..:.|||..         :|:..|.:::..|:
  Fly    75 DYNSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSE---------QDWNLVNDVHLKGS 130

  Fly   120 FNVIRLSAGLMGANEPNQDGQRGVIVNTASVAAFDGQIGQAAYSASKAAVVGMT----------- 173
            |...:.:...|      :....|.|:.|:|.:...|..||..|:|:|..::|:.           
  Fly   131 FKCTQAAFPYM------KKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAIEGARNN 189

  Fly   174 ------LPIARDLSTQGIRICTIAPGLFN-------TPMLAAL 203
                  :|.|....|:||    :...|||       .|::|.|
  Fly   190 VLCNVIVPTAASRMTEGI----LPDILFNELKPKLIAPVVAYL 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scuNP_523396.1 HSD10-like_SDR_c 3..255 CDD:187629 62/238 (26%)
Mfe2NP_001285318.1 hydroxyacyl-CoA-like_DH_SDR_c-like 8..257 CDD:187611 62/238 (26%)
PRK07791 11..248 CDD:236099 62/238 (26%)
PLN02864 315..598 CDD:178455
hot_dog <383..442 CDD:294345
HDE_HSD 471..592 CDD:239532
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447626
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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