DRSC/TRiP Functional Genomics Resources

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Protein Alignment scu and CG3842

DIOPT Version :10

Sequence 1:NP_523396.1 Gene:scu / 32789 FlyBaseID:FBgn0021765 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_572316.1 Gene:CG3842 / 31576 FlyBaseID:FBgn0029866 Length:406 Species:Drosophila melanogaster


Alignment Length:221 Identity:54/221 - (24%)
Similarity:93/221 - (42%) Gaps:46/221 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 IKNAVSLVTGGASGLGRATAERLAKQGASVILA------------DLPSSKGNEVAKELGDKVVF 54
            |...|.:|||..:|:|:.|...|||:||.|.:|            |:.....|:   :|.::.  
  Fly    72 IDGKVVIVTGCNTGIGKETVLELAKRGARVYMACRDPGRCEAARLDIMDRSRNQ---QLFNRT-- 131

  Fly    55 VPVDVTSEKDVSAALQTAKDKFGRLDLTVNCAGTATAVKTFNFNKNVAHRLEDFQRVININTVGT 119
              :|:.|.:.|...::..|.:..|||:.:|.||.....:|..        .:.|::...:|.:|.
  Fly   132 --LDLGSLQSVRNFVERFKAEESRLDILINNAGVMACPRTLT--------ADGFEQQFGVNHLGH 186

  Fly   120 FNVIRLSAGLMGANEPNQDGQRGVIVNTASVAAFDGQIGQ-------------AAYSASKAAVVG 171
            |.:..|....:..:.|::      ||..:|.|...|:|.:             .|||.||.|.:.
  Fly   187 FLLTNLLLDRLKHSSPSR------IVVVSSAAHLFGRINREDLMSEKNYSKFFGAYSQSKLANIL 245

  Fly   172 MTLPIARDLSTQGIRICTIAPGLFNT 197
            .||.::..|...|:.:....||:..|
  Fly   246 FTLKLSTILKDTGVTVNCCHPGVVRT 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scuNP_523396.1 HSD10-like_SDR_c 3..255 CDD:187629 53/220 (24%)
CG3842NP_572316.1 Rossmann-fold NAD(P)(+)-binding proteins 74..347 CDD:473865 53/219 (24%)

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