DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment scu and SPAC22A12.17c

DIOPT Version :9

Sequence 1:NP_523396.1 Gene:scu / 32789 FlyBaseID:FBgn0021765 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_593247.1 Gene:SPAC22A12.17c / 2541844 PomBaseID:SPAC22A12.17c Length:261 Species:Schizosaccharomyces pombe


Alignment Length:266 Identity:73/266 - (27%)
Similarity:109/266 - (40%) Gaps:50/266 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KNAVSLVTGGASGLGRATAERLAKQGAS--VILADLPSSK-GNEVAKELGDKVVFVPVDVTSEKD 64
            ||||  |.|||.|:|.|.....|:.||:  ::....|..| ..|:|:..|.|......|||..|:
pombe    22 KNAV--VFGGARGIGHAICSVFAEAGANAFIVYNTTPGEKAAKEIAQANGVKTYTCKCDVTIPKE 84

  Fly    65 VSAALQTAKDKFGRLDLTVN----CAGTATAVKTFNFNKNVAHRLEDFQRVININTVGTFNVIRL 125
            |..|....:..|..:|:.|.    |.|.:....|:          |:|...||:|.:|.|||...
pombe    85 VEHAFAEIQKVFDTIDIVVPNNGICTGKSAIDMTY----------EEFANEINVNLLGVFNVAHN 139

  Fly   126 SAGLMGANEPNQDGQRGVIVNTASVAAFDGQI--GQAAYSASKAAVVGMTLPIARDLSTQGIRIC 188
            :..:.      |....|.:|.|||::.....:  .|.||:.|||.|:.:...:|.:. .:..|:.
pombe   140 AGPIF------QKQGHGSLVATASMSGVVVNVPQQQCAYNTSKAGVIQLIKSLAVEW-RKFARVN 197

  Fly   189 TIAPGLFNTPMLAALPEK--------VRTFLAKSIPFPQRLGEPSEYAHLVQ--AIYENPLLNGE 243
            .::||...:.|......|        .|..|||.|        .|.|.:|..  |.|    .:|.
pombe   198 CVSPGYTTSDMTGGKFHKEWEPYTPFERNGLAKEI--------ASAYLYLASDAASY----ASGT 250

  Fly   244 VIRIDG 249
            .:.:||
pombe   251 NLIVDG 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scuNP_523396.1 HSD10-like_SDR_c 3..255 CDD:187629 73/266 (27%)
SPAC22A12.17cNP_593247.1 MDH-like_SDR_c 14..260 CDD:187610 73/266 (27%)
fabG 18..257 CDD:235500 73/266 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3886
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.