DRSC/TRiP Functional Genomics Resources

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Protein Alignment scu and R05D8.9

DIOPT Version :9

Sequence 1:NP_523396.1 Gene:scu / 32789 FlyBaseID:FBgn0021765 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_503753.1 Gene:R05D8.9 / 187609 WormBaseID:WBGene00019886 Length:281 Species:Caenorhabditis elegans


Alignment Length:266 Identity:73/266 - (27%)
Similarity:124/266 - (46%) Gaps:35/266 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VSLVTGGASGLGRATAERLAKQGASVILADLPSSKGNEVAKEL------GDKVVFVPVDVTSEKD 64
            |:||||.::|:|||.|...||.||.|.:....:.:..|..:|:      ...|:.|..|:.:||.
 Worm     9 VALVTGSSNGIGRAAAVLFAKDGAKVTVTGRNAERLEETRQEILKSGVPESHVLSVATDLAAEKG 73

  Fly    65 VSAALQTAKDKFGRLDLTVNCAGTATAVKTFNFNK---NVAHRLEDFQRVININTVGTFNVIRLS 126
            ....:.:...||||||:.||.||.|     ||.::   .|...:..:.:::.||       :|..
 Worm    74 QDELVNSTIQKFGRLDILVNNAGAA-----FNDDQGRVGVDQDVSVYDKIMQIN-------MRSV 126

  Fly   127 AGLMGANEPNQDGQRGVIVNTASVA-AFDGQIGQAAYSASKAAVVGMTLPIARDLSTQGIRICTI 190
            ..|....:.:....:|.|||.:|:| ....|.|...|:.||:|:...|...|.||...|:|:.::
 Worm   127 VTLTQKAKEHLVKAKGEIVNVSSIAGTAHAQPGVMYYAMSKSALDQFTRCAAIDLIQYGVRVNSV 191

  Fly   191 APGLFNTPMLAALP------EKVRTFL---AKSIPFPQRLGEPSEYAHLVQAIYENPL---LNGE 243
            :||...|....|:.      |::..|:   .:.|| ...:.:|.:.|:::..:.:..|   :.|:
 Worm   192 SPGGVTTGFGEAMGMPSGAFEEMMKFMESRKECIP-SGAVAKPIDIANIIAFLADRKLSSYIIGQ 255

  Fly   244 VIRIDG 249
            .|..||
 Worm   256 SIVADG 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scuNP_523396.1 HSD10-like_SDR_c 3..255 CDD:187629 73/266 (27%)
R05D8.9NP_503753.1 fabG 4..266 CDD:235975 73/266 (27%)
NADB_Rossmann 5..266 CDD:304358 73/266 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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