DRSC/TRiP Functional Genomics Resources

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Protein Alignment scu and F53C11.3

DIOPT Version :9

Sequence 1:NP_523396.1 Gene:scu / 32789 FlyBaseID:FBgn0021765 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_506413.1 Gene:F53C11.3 / 179872 WormBaseID:WBGene00009973 Length:313 Species:Caenorhabditis elegans


Alignment Length:267 Identity:69/267 - (25%)
Similarity:111/267 - (41%) Gaps:38/267 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 IKNAVSLVTGGASGLGRATAERLAKQGASVILA----DLPSSKGNEVAKELGDKVVFVPVDVTSE 62
            :...|:|||||.:|||:|.|...|..||||.:|    |:.....:|:....|.......:||...
 Worm    24 LNGKVALVTGGGTGLGKAIATTFAHLGASVAIAARRLDVLEKTADEIRSSTGGVCEPFQMDVKDP 88

  Fly    63 KDVSAALQTAKDKFGRL-DLTVNCAGTATAVKTFNFNKNVAHRLEDFQRVININTVGTFNVIRLS 126
            ..|:.|....:.|.|.. |:.:|.|.....:.|...:.|.      :..:|:|...||.:|    
 Worm    89 AKVAKAFDAVEKKLGHTPDILINNAAGNFIMATERLSPNA------YGTIIDIVLKGTLHV---- 143

  Fly   127 AGLMGANEPNQDGQRGV-------IVNTASVAAFDGQIGQAAYSASKAAVVGMTLPIARDLSTQG 184
                    ..:.|:|.:       :::..::.|..|.......:.|||.|..||..:|.:.:..|
 Worm   144 --------TTELGRRCIQQKRGASVLSITTLYAQSGAPFVVPSAVSKAGVENMTKSLASEWAKHG 200

  Fly   185 IRICTIAPGLFNTP-----MLAALPEKVRTFLAKSIPFPQRLGEPSEYAHLVQAIYENPL--LNG 242
            :|...||||...|.     :.|...:.....:..|:|. .|||.|.|.|:|...:..:.:  :||
 Worm   201 LRFNAIAPGPIPTEGAFGRLFAGELKDSGDAMKASVPV-GRLGHPEEIANLAAFMSSDFMSWMNG 264

  Fly   243 EVIRIDG 249
            .:|..||
 Worm   265 AIIDFDG 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scuNP_523396.1 HSD10-like_SDR_c 3..255 CDD:187629 69/266 (26%)
F53C11.3NP_506413.1 TER_DECR_SDR_a 40..275 CDD:187627 60/251 (24%)
PRK07677 40..273 CDD:181077 60/251 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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