DRSC/TRiP Functional Genomics Resources

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Protein Alignment scu and tmeff2

DIOPT Version :9

Sequence 1:NP_523396.1 Gene:scu / 32789 FlyBaseID:FBgn0021765 Length:255 Species:Drosophila melanogaster
Sequence 2:XP_031748286.1 Gene:tmeff2 / 100036670 XenbaseID:XB-GENE-854443 Length:370 Species:Xenopus tropicalis


Alignment Length:57 Identity:16/57 - (28%)
Similarity:23/57 - (40%) Gaps:12/57 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 GRLDLTVN-------C----AGTATAVKTFNFNKNVAHRLEDFQRVININTVGTFNV 122
            ||.:.|||       |    :|:....|.||....|...:. ||.|:....:||..:
 Frog   272 GRCEHTVNMLKPWCRCDTGYSGSHCEKKDFNVLYVVPGPVR-FQYVLIAAVIGTIQI 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scuNP_523396.1 HSD10-like_SDR_c 3..255 CDD:187629 16/57 (28%)
tmeff2XP_031748286.1 MFS <82..167 CDD:421695
KAZAL_FS 91..131 CDD:238052
KAZAL 177..223 CDD:197624
PHA02887 <232..297 CDD:165214 7/24 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165174788
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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