DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7206 and Swt1

DIOPT Version :9

Sequence 1:NP_996499.1 Gene:CG7206 / 32788 FlyBaseID:FBgn0030892 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_001099430.1 Gene:Swt1 / 289088 RGDID:1308695 Length:910 Species:Rattus norvegicus


Alignment Length:429 Identity:104/429 - (24%)
Similarity:181/429 - (42%) Gaps:72/429 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SLGGESKHTPKSSNLRPLDDDQLVRIISTPRPSNGVSQHPAQDRLKRLQGQLKRVQDNEKEQGTT 66
            ::|.:..:..||.:|..:..|...:.....:..|..|. ..|.::|.|:.:......:|:.:..|
  Rat   146 NIGSKLDYEIKSRSLIKITKDMKSKAEDQTKEKNWPSL-LIQKKMKELKKEKNNKDSSEELEKCT 209

  Fly    67 K----------RITHSSSASRRSSASTSTPQRLLKFPPKVAMNAWEKPKALVDANRLKAGRTQTA 121
            |          .|......|.|...|...|::......|:|    |:....||:::.|:  .|..
  Rat   210 KNQPPQNYNFSNIIKEPLESGRKKISFKIPKKSSSALQKLA----EENIFSVDSSKSKS--KQEG 268

  Fly   122 YQRLMLLRASL-----QQKQLYEE--RNNNIVAKINEEVIEKQPEACNITNPSAFDGSTASDMEV 179
            .:.|...|.||     :.:.|:.|  ..:.:..:..|..:|.|.     ||.|....:.|...|.
  Rat   269 KEHLQSHRVSLSLERHKTENLFSESTHKHTVCERRREYHLEHQE-----TNGSDSKENCAQSFET 328

  Fly   180 EPMEWQESIEEEAAQNDQDEAKKGDDTLLMLPAESIEEEA-PQKGQDEAKE----EDDT-----I 234
             |.   .|:..|..|:..:|.:..::.......:|::..| |..|:..:.|    |||.     |
  Rat   329 -PC---SSVSSETIQDTDEEMQIVEELHAARVGKSVDLPAGPPSGELMSMEIDLVEDDVHSSADI 389

  Fly   235 LMLQAADAEELPPRLEDYMYFVLDTNVLIHNHKFVERLTDVVLPGTVGSMLYLPYIVIKELDKLK 299
            |...|:|.:         :..|:|||:|:::.|||..|....:||....:|.:|::|::|||::|
  Rat   390 LSNTASDKK---------LLIVIDTNILMNHLKFVRILKTTEIPGFDTLVLIIPWVVMQELDRMK 445

  Fly   300 SKYQSDCLQRV--IAMRAIRFLNTK--------FDESFQIQAQSALEEADHLIKIDCPDDSILNC 354
            :   ...|:.|  .|:.||.|:|..        :.:|.|:.:|.....:|     :..||.:|.|
  Rat   446 A---GKLLKHVQHKAVPAIHFINDSLKSQDRKLWGQSLQLASQKLYGLSD-----ENNDDRVLKC 502

  Fly   355 CLQLQAQVP--HMILLTNDANLRLKANASNIQVSCRSDL 391
            |||.|...|  .:||.|:|.|||.|...|.::...:.:|
  Rat   503 CLQYQELFPCSLVILCTDDRNLRSKGLISGVKSLSKEEL 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7206NP_996499.1 PIN_Smg5-Smg6-like 254..392 CDD:189050 48/150 (32%)
Swt1NP_001099430.1 PIN_Smg5-Smg6-like 400..544 CDD:189050 48/150 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352913
Domainoid 1 1.000 66 1.000 Domainoid score I9754
eggNOG 1 0.900 - - E1_KOG4689
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007053
OrthoInspector 1 1.000 - - oto98189
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.740

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