Sequence 1: | NP_996499.1 | Gene: | CG7206 / 32788 | FlyBaseID: | FBgn0030892 | Length: | 404 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_060045.4 | Gene: | SMG6 / 23293 | HGNCID: | 17809 | Length: | 1419 | Species: | Homo sapiens |
Alignment Length: | 391 | Identity: | 90/391 - (23%) |
---|---|---|---|
Similarity: | 148/391 - (37%) | Gaps: | 118/391 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 86 PQRLLKFPPKVAMNAW----------------EKP----------KALVDANRLKAGRTQTAYQR 124
Fly 125 LMLLRASLQQKQLYEERNNNIVAKINEE--VIEKQPEA-CNITNP-SAFDGST-ASDMEVEPMEW 184
Fly 185 QESIEEEAAQNDQDEAKKGDDTLLMLPAESIEEEAPQK---GQDEAKEEDDTILML------QAA 240
Fly 241 DAEELPPRLEDY------------MYFVLDTNVLIHNHKFVERLTDVVLPGTVGSMLYLPYIVIK 293
Fly 294 ELDKLKSKYQSD----CLQRVI---AMRAIRFLNTKFD----------------ESFQIQAQSAL 335
Fly 336 EEADHLIKIDCPDDSILNCCLQ-----------LQAQVP-----HMILLTNDANLRLKANASNIQ 384
Fly 385 V 385 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG7206 | NP_996499.1 | PIN_Smg5-Smg6-like | 254..392 | CDD:189050 | 47/171 (27%) |
SMG6 | NP_060045.4 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 25..79 | ||
EJC-binding motif 1, mediates interaction with the EJC | 39..59 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 99..165 | ||||
Interaction with telomeric DNA | 114..503 | ||||
EJC-binding motif 2, mediates interaction with the EJC | 133..153 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 177..405 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 419..472 | ||||
EST1 | 638..741 | CDD:287360 | |||
EST1_DNA_bind | 751..1103 | CDD:287359 | 11/67 (16%) | ||
TPR repeat | 765..795 | CDD:276809 | |||
TPR repeat | 800..823 | CDD:276809 | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 854..883 | ||||
PIN_Smg6 | 1241..1416 | CDD:189055 | 47/177 (27%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1427 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.030 |