DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7536 and VTC2

DIOPT Version :9

Sequence 1:NP_001285398.1 Gene:CG7536 / 32786 FlyBaseID:FBgn0030890 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_116651.1 Gene:VTC2 / 850544 SGDID:S000001890 Length:828 Species:Saccharomyces cerevisiae


Alignment Length:713 Identity:147/713 - (20%)
Similarity:250/713 - (35%) Gaps:197/713 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKFAEHLSAHITPEWRKQYINYEEMKAMLYLAVEEAPSVESVEDDVLKRHFANFDENFFHYCDKE 65
            |.|...|:..:.|.|:..|||||.:|..|     :..||:...:|...|...:.:..|....|||
Yeast     1 MLFGVKLANEVYPPWKGSYINYEGLKKFL-----KEDSVKDGSNDKKARWDDSDESKFVEELDKE 60

  Fly    66 LKKINTFYSEKLAEATRKFATLNAELKTSIEESERSAKKSKGHKRHAALPDRKARELKLAFSEFY 130
            |:|:..|..:|......:.:.|..:..|                 .||:....|...:....|..
Yeast    61 LEKVYGFQLKKYNNLMERLSHLEKQTDT-----------------EAAIKALDADAFQRVLEELL 108

  Fly   131 LSLILLQNYQNLNHTGFRKILKKHDKLLRVDTGAKWRQEYVEASHFFTNKDIDNIINETETTVTG 195
            .....|.|::.||.|||.||:||||||.         .:|                    .:|..
Yeast   109 SESTELDNFKRLNFTGFAKIVKKHDKLY---------PKY--------------------PSVKS 144

  Fly   196 ELEGGDRQRAMKRLRVPPLGEQQSPW---TTFKVGLFSGSFIVLVIVVVVSAIFHEISGENLKVT 257
            .||       ::...:|...|:.||.   .:|...:...:|......:..::.|..|...::.:.
Yeast   145 LLE-------VRLKELPSHSEEYSPLLYRISFLYNILRSNFNTASEPLASASKFSSIVSNDIDMN 202

  Fly   258 FRLYR-----------GPLLIIEFIFLIGVNIYGWRSSGVNHVLIFELDPRNHLSEQHLMELAAI 311
            ||.::           ...::.....|:..|:.......||.   ||.|..|  :::.:...::.
Yeast   203 FRSFKFWVHNDNLMEVKTRILRHLPVLVYANVPSENDDLVNR---FESDISN--NDEIVGSSSST 262

  Fly   312 FGVIWTLSMLSFLYSASLAIPAFINPLTLTLIMVLFLANPFHVLYHDARFWLWRITGRCVSAPFF 376
            ..|...|...||            :|    ||..|:..|....||:|.   |.::.    |||..
Yeast   263 SSVEHGLGARSF------------DP----LINTLYFDNEHFELYNDK---LLKLN----SAPTL 304

  Fly   377 HVGFADFWLGDQLNSLATAILDFEYLICFYFTNGNWTEARDAS------ICMEKDFIIRPIVNCL 435
            .:.    |.| ||:......|:.:.||        ..||...|      :.:::.||        
Yeast   305 RLR----WTG-QLSDKPDIFLEKKTLI--------EDEATGKSEFDLTKLQLKQKFI-------- 348

  Fly   436 PAWFRF-------AQCLRRYRDSREAFPHLVNAGKYSTTFMVVIFATLKSFHSPN-YASTFDNPY 492
             ..|.|       .|.|::.::|..|...|..        :...|:.:::|...| ....|...|
Yeast   349 -NGFIFEGDKKFKEQTLKKLKESGTAGRDLER--------LEEDFSEIQNFIIKNELQPVFRTVY 404

  Fly   493 TWLWIIASIVSSCYAYTWDIKMDWGLFDKN---AGENTFLREEVVYSSTGFYYFAILEDLA--LR 552
            |         .:.:....|.|:...: |.|   ..|::|.||..:.....::...|..::|  |:
Yeast   405 T---------RTAFQIPGDDKIRVTI-DSNIVFIKEDSFDRERPIRDPNTWHRTDIDANVANPLK 459

  Fly   553 FIWA-----LSFYLTEMKIVSS-DIMTSVTGILEVFRRFVWNFFRLENEH---LNNCGKFRAVRD 608
            |:..     ..:.:.|:|:.|| |...|.:.::        :..:|..:|   ||:......|::
Yeast   460 FLRGGEYAKFPYSVMEIKVKSSLDSSMSASSMI--------SNVKLPKKHGQWLNDLTNSHLVKE 516

  Fly   609 I--------SIAPLDSSDQALILR---LMD-EADGVINRYTKANRPKPKKVKDPEKRSLLQTR 659
            |        .:|.|...|:.|.:.   |.| |.|         .|..||:..:.||:.||:.:
Yeast   517 IPKFSIFVQGVASLYGDDEKLDILPFWLPDLETD---------IRQDPKQAYEEEKKKLLKQK 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7536NP_001285398.1 SPX_XPR1_like 2..156 CDD:269898 41/153 (27%)
SPX 3..158 CDD:281146 43/154 (28%)
EXS 258..597 CDD:281164 71/377 (19%)
VTC2NP_116651.1 COG5036 1..555 CDD:227369 141/696 (20%)
VTC1 662..791 CDD:227589
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343543
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.569298 Normalized mean entropy S1995
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.790

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