DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dhc16F and CG9068

DIOPT Version :9

Sequence 1:NP_523394.1 Gene:Dhc16F / 32785 FlyBaseID:FBgn0283476 Length:4081 Species:Drosophila melanogaster
Sequence 2:NP_611111.1 Gene:CG9068 / 36817 FlyBaseID:FBgn0034106 Length:1227 Species:Drosophila melanogaster


Alignment Length:1299 Identity:243/1299 - (18%)
Similarity:452/1299 - (34%) Gaps:411/1299 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly  2389 QSLTRLASHVN--------EYNCWQ---IEMRRNYDLNAFHEDLRVLYRIAGIDNQPVTFLL-ID 2441
            :.|.:|..::.        ::..||   :::.|.:.|.. ||.|..:|    .|...:...| :.
  Fly    44 EELNQLVGYIQRMSVLSCLDHRDWQEGTLDIIRGWLLEV-HEPLLTIY----YDRDALAACLGMP 103

  Fly  2442 SQIVEE--EFLEDINNILNSGEVPNLFEGDEFEKIILDARDGCNENRKDDPCTRDDIY-KFFINR 2503
            |..|.:  .|..:.|.|.:   |....:...|..:..|. |||...      ..|.:| .||.|.
  Fly   104 SMCVSDLSYFRREPNEIFS---VEGFHDEINFGTLTSDV-DGCLME------LLDRLYVPFFRNY 158

  Fly  2504 VRNNLHVVMSMSPVGDAFRRRCRMFPSLVNCTTIDWFTSWPTEALYSVALGLLTKIAPKMEDRIS 2568
            :..|..|           |.|.        |:::|.|.::.:...:.:: |:.....|.:...::
  Fly   159 LEWNATV-----------RNRF--------CSSMDRFLAFLSGMHHQIS-GMSVMYVPFVIKELT 203

  Fly  2569 LASTTVFMHKTVEDASVKFYKEMKRHYYTTPSSYL---ELLKLYQNLLKIKN-MEIIAKRKRIAN 2629
            ......::..::|..::         |:||....|   :.|.:..:|:.::: .|....|..:..
  Fly   204 AGPVDRYLVGSLEGIAL---------YWTTQIRTLLADDTLTVPHDLVTVRDEFEFWEYRYEVLQ 259

  Fly  2630 GLNKLL---ETNEVIAVMGKELEVMVPQLDEKSAMMKSLVDNLTKET-KQADAVKQSVLEDEMNA 2690
            |:|..|   :..:|:.::.....|.:||:|       .|::...||. |....:|...|..|..:
  Fly   260 GINDQLAHSDVQKVLLLLHNAQSVHMPQMD-------GLIERARKELHKSLSNIKYLHLLIEPCS 317

  Fly  2691 KEKAAVAQAISEDAGKDLEIAMPAL-------------REAEEALKGLTKADINELKSFTT---- 2738
            |..||.:.|       ||...:|.:             ......:..|.:...|::..|.|    
  Fly   318 KIDAATSPA-------DLTKLLPRIIHLIRFIWLNSEYYNTTRLIAALFRNLSNQIIRFCTKQTK 375

  Fly  2739 --------PPALVQFCMEAV-CIL------------LGVKPT---WASAKAIMAD-IN-FIKRLF 2777
                    |...::.|..|: |.|            |..|.|   |...:.::.: |: |::|| 
  Fly   376 VEEILSGKPRFGIRICNVAIECCLTYRGIYDTISRDLAQKHTQMPWELDEGLIFNHIDAFVERL- 439

  Fly  2778 EYDKEHMKEDTLKKVKKYI-----DHKDFVPAKF------EKVSKVAKSMSM------------- 2818
                    .|.:...:..|     |....:|...      |::.|:|:|:.:             
  Fly   440 --------NDVIDICESMIVFGRLDENGSIPKPVFGGTCGEELEKIAESVEVQFLDTLNKLQQNS 496

  Fly  2819 -----------WVISMDKFSKVYKVVEPKIKR------------KEAAEA--------------- 2845
                       |...:..|.|..:.:|..::|            :|..||               
  Fly   497 QAYILNVHRADWYADVAGFRKNMQKLEETVQRLIFNVFQQVSNVEEMLEALQAMLFYSYRQRGTL 561

  Fly  2846 ---ELKEVMTVLRQKQKELAAVEAKIQGLRDSLEEKQREFQVIQDNVDLTYG-RIN--RAGRLTS 2904
               .|||...:.|...||:.|...|:      |||:.|| ..:..:|.:..| |||  |...|..
  Fly   562 RKTYLKETSKLWRMFSKEMDATSRKL------LEEQSRE-SWLSKHVSIALGYRINLERLTWLRD 619

  Fly  2905 ALSDEQVRWRETVKSLTGDLACVPGDVLVAAACVAYLGAFSHEYRRDMSAL---WVSKCREHKIP 2966
            .|.:.:  |...||.              ::..:|...|..||:::::...   ||:||      
  Fly   620 RLKNSE--WLPAVKE--------------SSPALAKFDALRHEFQKEIRLAYDDWVAKC------ 662

  Fly  2967 SSPEFNLLKVLGDPYEMRQWNVDGLPKDNISIENGIYATRALRWALMIDPQEQANRWIRN----- 3026
            .....:|.:.|.....:|.....||.:.||.             |.:::..|||..:.|.     
  Fly   663 CGFSGDLCQRLDRYLVVRSKKFKGLLECNID-------------ASVLELCEQAQHFERMGFAIP 714

  Fly  3027 ------MERANNLQ-----VIK--MTDSTMMRVLENAVRQGYPVLLEEINETIDPSLRPILQRET 3078
                  .||.:.::     :||  ::.:.::.||.:..|:.:..|::..:..:.|.:..|.....
  Fly   715 STMKKLYERYDTIRSLYNGIIKLALSHNRILAVLSDRERKLFRPLIQACDRQLAPGVFKITYGSE 779

  Fly  3079 YR---FEGRTYLKLGDMVIDYDDNFKLYMTTKLPNPHYLPEVCINVTLVNFLVTESGLEDQLLAD 3140
            :.   ||..|     :.:.::.:...::............::| ...|::|..  ||..|     
  Fly   780 FNEEFFEDGT-----EFIAEFQELVLIFKRANRGVARICEKIC-GTCLLHFAF--SGSVD----- 831

  Fly  3141 IVAIELPAMEIQRNDLVVKINSDKQQLLALEDKVLKLL--FNSEGNILDDE---ELVETLNDAKE 3200
                    :.:.:..|..:::|....|.:....|::||  |:.:...:|||   |.:..:||..:
  Fly   832 --------ISVFQQQLSSRLSSSGDILRSYYSHVVELLSAFSGQFQSVDDEMSAEWIAYVNDMDD 888

  Fly  3201 ---TSLIIAAR--------------------LI----DTEETEKVITASRERYRILASRGAILYF 3238
               :||:.:||                    :|    |.::...|.|...:      :.|.::..
  Fly   889 MLASSLMTSARGSLNKLYEALHCDADMASAPIIVVESDVKDGRIVFTPDMD------AIGDMING 947

  Fly  3239 VVAGL-AEID--PMYQYSL----KYFTQVFCNVLRLDHP----PQSVEVRISTLMTDELRAIFD- 3291
            :|..: :.:|  |...|.|    |...|.|.:|.|.|..    .:|::..|. :..:|| |.:: 
  Fly   948 IVDSIRSMLDQFPRLGYKLKLPKKQQRQGFASVFREDQECSELMRSIQAEIG-IQREEL-AKYES 1010

  Fly  3292 --NISRGLFENHKIIFSFLLALSVERQEGRVTEEEFLFLSRGPVGNIRTKIQPAKIKMSQIEW-- 3352
              |.:|.|::                    .|||||.       ..:.:|.:.|.:....||.  
  Fly  1011 EWNKNRVLWQ--------------------TTEEEFR-------QRLMSKSRTAGVFEGGIEHYS 1048

  Fly  3353 ---DSCIFLEDNFSSFFSGLTDELDKPFFIQMQEN---KEVFDFAQTNQPPTDKW---NKRLRVF 3408
               |..||            .|.:...:||.:.:|   ..:.|:       .:||   |.::.:.
  Fly  1049 ALADDVIF------------EDAITNVYFILINQNALKSTMLDW-------IEKWQALNIKMLLD 1094

  Fly  3409 HKLMFISAF-----RKPRFLLNVVCYLQSTV-GKYFTEASGGTQLSSVYLDTSAVTPL--IFVL 3464
            |....:.|.     |..|.::.|...::.|| .|...|    ..|..|.:..||.||:  :|||
  Fly  1095 HGSNLMGAVYRYMRRNERNVMKVPRTIRETVAAKQLFE----KLLKDVPVKQSAFTPMLELFVL 1154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dhc16FNP_523394.1 DHC_N2 829..1234 CDD:285579
P-loop_NTPase 1373..1603 CDD:304359
P-loop_NTPase 1687..1832 CDD:304359
P-loop_NTPase 1994..2264 CDD:304359
P-loop_NTPase 2343..2613 CDD:304359 43/241 (18%)
MT 2625..2957 CDD:289543 83/449 (18%)
AAA_9 2985..3201 CDD:289547 41/244 (17%)
Dynein_heavy 3342..4066 CDD:281078 32/142 (23%)
CG9068NP_611111.1 DHC_N1 211..784 CDD:285571 118/646 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450606
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5245
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100025
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.730

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