DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dhc16F and dhc-4

DIOPT Version :10

Sequence 1:NP_523394.1 Gene:Dhc16F / 32785 FlyBaseID:FBgn0283476 Length:4081 Species:Drosophila melanogaster
Sequence 2:NP_001338793.1 Gene:dhc-4 / 189209 WormBaseID:WBGene00012272 Length:2727 Species:Caenorhabditis elegans


Alignment Length:3384 Identity:604/3384 - (17%)
Similarity:1145/3384 - (33%) Gaps:1106/3384 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   191 SLREVEYKDLNTYEPFYTVTRHGVT---FWH------------------CSENFFTPLDQW---Q 231
            :|.|.|:..|..:..:.|:  |.|.   .||                  |.:.|.    :|   |
 Worm     3 NLLEKEHFKLRKHTRYLTI--HRVVEQKSWHQLAYEDRLRRESRKIPKICRKQFL----KWHVEQ 61

  Fly   232 QE----FKQFLSIIQIRSFSIFRLWKGFKVWEK-----TIKW-----RKLNEARDYLQNNL---- 278
            ||    |::.....:..|..:.:||  :.|.:|     .::|     .||:...:.:...|    
 Worm    62 QEAKKKFRRLREKNRDESIYVAKLW--YYVLKKHPLKPRVEWSFQRVHKLSPKNERIAQELEELM 124

  Fly   279 -----FIVIPQLAKAILRMRSDIVQLQRLNFVNVSNIENWHPFYFLETHMRIYEQLHKTFTDFRE 338
                 :.:|..:|....:...|  :|.|||     .||.:|      .|::          :.||
 Worm   125 DCAERYALIENVADGYQKRVKD--ELARLN-----KIEKYH------HHVK----------NNRE 166

  Fly   339 FIAKTIFRACTDAIQARGFYP-------------DDEVNYYPSLKKMREAHSFMDRARKRAFCKT 390
            .:.::...|   |::.|.|:.             |.||...| :||.||.              |
 Worm   167 ILLRSQSLA---AMKIRIFFENRKGLIFEVNELIDPEVGNIP-IKKFREV--------------T 213

  Fly   391 LTNFLTYCDMMVYQMLYRITKKSFED-----LATSFEVHDEVGPSEADINKHDRVDKRIEKQRPQ 450
            ||..|.:..    ::..::.||::.|     :..:..|.:....:...|..:.:..:        
 Worm   214 LTKVLEFSQ----EINMKLLKKNWRDEKKRNIVQNCIVQETTNAAFGTIQAYLKTLR-------- 266

  Fly   451 DKPQSPFFLAMLRLLPDRIDIEPSEDIIRIIFQRIT---------------------GLILETVL 494
               ..|.||::..::.||.....||.|..::.:.|:                     .:|...||
 Worm   267 ---NKPAFLSIDCMIVDRKLWVNSEQIRLLLKEPISVMCALENVRMSTEDCETWQEEAMICVEVL 328

  Fly   495 EIHPFTTDPFFTQY--------TQPSIMGRQEEVLYEGAPDLH--------------YLLR---- 533
            ........||...|        ..|.:...:...:|:.:..|.              ::||    
 Worm   329 SHELIVHHPFIQPYAFLIDDYKVSPKLTEEELIKMYDDSTHLQIRLTKAVKLLTIRCFVLRLESV 393

  Fly   534 ---ADIRFQYNRKNMFVLIRKAYERARLYTQRFHQIRENFEID-----NSTDPTVLNTER---DL 587
               .|.|.:..|..:.:.||:.:  ..|..:..|..|   :.|     .|.||:::.:.:   ||
 Worm   394 WSEVDRRIRSFRNQLKMAIRRKF--TTLLNKLLHDFR---KYDRALQYRSIDPSMMLSNKAQVDL 453

  Fly   588 QILRAYCDRYCNNVRALDGILEYVFLGLLKLTQ-----TNFKDTVTPVCSRLQNVLATYLPKLAE 647
            .:.....|    :||....:.:.||    ::||     |:..||:..:.|     |...||:.  
 Worm   454 MLQNEIGD----SVRQFVEVYDKVF----EITQHISLDTSQLDTLLQLAS-----LRLSLPQC-- 503

  Fly   648 EETTRLYEEAQDFHGRICYEPHETLEIVAHIRFLDKCSTELDGIFDGIDYVHDLLLIIKDFGIPI 712
                 :.:.|..|..||.          ..:.|:.|..::   :...:....:.|.|::..|.| 
 Worm   504 -----INDHAHFFQKRIS----------TFLHFVTKKQSK---VMSNVQKAMEKLKIVQTMGNP- 549

  Fly   713 DDDSKEDYMDTEDYLN---RTRETLEEIREKRQDFINRLEDAMQ---DDIAALKEDIHEVAIEAL 771
                    .:.::||.   :.|..|:.:..:.:| :|:.|.|:.   .|:..::..:.|:     
 Worm   550 --------QEVDNYLTQMAKLRPMLDNLITEIED-LNKFETAVDIQVSDVTKMRHFVGEI----- 600

  Fly   772 QPWLLDANSNRLSVTNKLDSMLERLNKCRETADEFLGYQKEFQIDLTMYDEMASGFYDIRMRQNL 836
                           ..|.|:.|..:          ||.|.           .:.|::.|     
 Worm   601 ---------------GSLQSLFEATS----------GYYKH-----------VNAFFESR----- 624

  Fly   837 YRTWSDWEESLAEWIVSDFNTLNVVDMVELNSKTIKNCMQFQKYLPENNIVPVLQKSAEAFKEKL 901
             ||           :|:...:.|.:|...:.....::.:...:  ...:.:...:...:|||:..
 Worm   625 -RT-----------LVNIDASRNFIDQFTIQLSIFESSLTTHR--AAKHFIAYARNEVDAFKKNF 675

  Fly   902 PVIGYLRNPNLRARHWAEIEDLLNRKFFQEKDILIQTYEDVHAFDDVAIGEALMQ---ISSQATG 963
            .|...:....|...||..:.:::.      .|:.......:....::.:...|.|   |:..|..
 Worm   676 AVAEVMSCRRLLDAHWLRMSEIVG------FDLTPYANSSIAQICELGLEAHLQQLKPIAFSAER 734

  Fly   964 EVQLENMLKGIETTWKE----------------TELSIVPHHDAKDVFILAGTEELQAVLDDSNV 1012
            |....:.|..|.|.|.:                .:||.:.|....|:..|.....::.:.|||  
 Worm   735 EATAADQLHAIVTFWSQEPLEMRCYVQWKLSLALKLSELHHRVQNDINTLKHMTNVEQITDDS-- 797

  Fly  1013 NINTIAASKFVGPIKSKVDEWINAMDQFAKTFESWMDCQGAWIYLEAIFASADIQRQLPHE---- 1073
                             :.:||....:..|..::|.:.|..|:.:..||.:.....|..:|    
 Worm   798 -----------------LPQWIEWTARAEKILKAWCETQQKWMRVANIFVTCRDTLQKEYELLRT 845

  Fly  1074 -AKMFFTVDKSF--KETVRQAKKVALALPTMSSVDVHKVLVENNRLLDLISRGLEAYLEVKRVVF 1135
             ||.|..::::.  .||:.:    .:.||.:... :.|:    |.::.:|.:|:...|:..|:..
 Worm   846 CAKYFIKIERNVLKDETIYR----VMQLPHLPCW-IQKI----NSMVSIIIQGVRGLLDGMRMNN 901

  Fly  1136 PRFYFLSNDELLEILAQTRIPQAVQPHLRKCFDAIYRLEFGSKEGGDGKMVATNDIVAFLSPEGE 1200
            .|....|...||.:.:.|.|...::..|:.||.::.||.|..:                     .
 Worm   902 ARLCLSSEVHLLNLFSTTSIETRLKLLLKDCFPSLRRLCFNRR---------------------N 945

  Fly  1201 KLQFGKGLKARGAVEEWLSKVEEAMFVSCKRYMRFGYQCYPAKEREDWFQDHPNQVVLTVSQVQW 1265
            :|:....|:.:..|:...|::|                           ...|.:::.::.|. :
 Worm   946 QLEMVDLLEEKVTVDLTKSEIE---------------------------SQEPCELIRSIEQA-F 982

  Fly  1266 AADIHRI--YEGKERNPLNILEKMAKFEIKCLKDLGALAALTRKNISSLL--RKILCALITIDVH 1326
            |:.:..|  ||.::|:             |....:||       |::.|:  |:.|..|....| 
 Worm   983 ASKLTDIITYERQDRS-------------KAASRVGA-------NVAELIETRQTLDPLFLSRV- 1026

  Fly  1327 AKDSVRMLIEKEVCKASDFNWLKMLRFYWADETETVYSRMAAANIPYYYEYLGAGGVLVLTPLTD 1391
              :....:..:.|.:.|    |..:.|.::.|......|..|       :...:|.:::|..   
 Worm  1027 --EKTYYIQHRSVQRQS----LLTVDFVYSTEINRFIPRSLA-------DSWSSGHIVLLIG--- 1075

  Fly  1392 RCYLCLMGAFQMDLGGAPAGPAGTGKTETTKDLAKALAKQCVVFNCSDGLDYKMMGRFFSGLAQC 1456
              .:|...:|.:                   .||..:.....:.|....|:...:.|...|:|..
 Worm  1076 --EMCSTRSFVL-------------------RLANCMCSNLRIVNSHQLLEPAFLERVTKGIAMS 1119

  Fly  1457 GAWCCFDEFNRIDIEVL----SVIAQQLITIRTAKAMRVKRFIFEGREIKINRSCCVFITMNPGY 1517
            ..:...:..:.:|.:::    .::|.|:.:.       .:.|:....|||               
 Worm  1120 SWFVLLENVDLLDSQLIFKLFKILASQVTSF-------PRLFLSSTDEIK--------------- 1162

  Fly  1518 AGRTELPDNLKALFRPISMMVPDYALISEVILYSEGFEDPKILARKMVQMYQLCSQQLSQQNHYD 1582
               .:||.|:               .:..:.::.|..|                           
 Worm  1163 ---NQLPTNI---------------AVEHLGVFHEFVE--------------------------- 1182

  Fly  1583 FGMRAVKSVLVMAGALKRASPNQREDITLIAALRDSNIPKFLADDAVLFRGILSDLFPGVELPDS 1647
                              .||..:.:.:.::::|.|:|||..|.       ::|...|    |.|
 Worm  1183 ------------------VSPAFKFETSPLSSVRTSSIPKLPAQ-------LVSTGQP----PSS 1218

  Fly  1648 QHPHLEASLRLGLRQKNLQA-----VPTTIRKCLQ--------LYETMCVRWGVMLVGPTGGGKS 1699
            .|..|...:...:|.:.:..     ...|:::.||        :|..:.||            ..
 Worm  1219 PHSVLLEKIGAKIRNREISGCVGSLAKETLKETLQNFPEKIIWVYTDVFVR------------DQ 1271

  Fly  1700 VVLHALEFALSH---LFENEVQDP--------NFRPVVIQTMNPKAVTMNEL---YGYVDLKTLE 1750
            :|..:.|||.:.   ||  ||..|        :.......|::..:||:|.:   ||:.:.    
 Worm  1272 MVTRSDEFAATQSGILF--EVLSPATTGNGGSDSERSYHSTISTSSVTINTIVVFYGFSEF---- 1330

  Fly  1751 W------------QDGLLGLAVRTA--TTVED-------EIHQWIMCDGPVDAVWIENLNT---- 1790
            |            :|   |.:.:|.  .|::|       |..|::||....:..   :|||    
 Worm  1331 WNIFPFISPLFLKKD---GYSAQTPPFLTLDDGSTYWPQENVQFLMCIPDEEGF---HLNTVKKF 1389

  Fly  1791 -----VLDDNKMLCLANSERIKLTAWIHMLFEVQDLLQASPATVSRCGMVYVDPGDLGWIPLIDT 1850
                 |:::|..:.:|.|.|   ..|.....|:                       ...|.|::.
 Worm  1390 DIPFHVVNENLKMDVARSWR---KVWHKKYTEL-----------------------FNKISLVEI 1428

  Fly  1851 WRE-VDMKHKLPAPLAEFCYQLF--------VGYFDKALKIERKRAVYTIHQVLGSKVRLCCELN 1906
            ..| ||   ::.:|:|......|        |.|.|....|...| :.:::..|    |:...|.
 Worm  1429 MDELVD---RILSPMASHFKSTFLWPSTLFQVIYHDLTEVIPTSR-ITSVNDTL----RITVVLA 1485

  Fly  1907 SAQFEAVKWSAMSEEQGKELVTKIFAWAVLWAIASNLKDAEKVSFEEQWSKAIAQHPNMTLPNFT 1971
            :|.|.::    .:::|||  |.|....| |.||      .||:|.:              :|: .
 Worm  1486 TANFISI----FADDQGK--VEKYMGRA-LGAI------REKLSIQ--------------MPD-D 1522

  Fly  1972 LWNYRI---DLEKMDWGSWID-IMAKFVFDPETSYYDMQVPTVDTTKYGYVSDLLFKRGMPVMVT 2032
            :.|::|   |..|:  ..|.| ...:...|.:::..::.:.|.:..:..:.|..|...|..::|.
 Worm  1523 ICNWKISYQDATKL--VRWEDEPFCQSSIDKDSAIGNIMIVTPNMDRLLFYSIRLLASGHNILVH 1585

  Fly  2033 GDTGVGKTVLAISCMKRLSQGNVIPVILNFSAQTSSNRTQEM--IEGPLEKRKKTQLGAPV---- 2091
            |.....||:.             :.:|..|.:.|..:.|.|.  ::|      |:::|..|    
 Worm  1586 GPPYSRKTMF-------------VKMISKFLSSTVGDLTVEFLWLDG------KSRVGNDVAQKK 1631

  Fly  2092 -------------GKTVIVFIDDVNMPKLDTYGASPAIELLRQFLDFKGFY-------------- 2129
                         .|.:.:.||..:.       ..|.:.::..|:|.|.::              
 Worm  1632 FADVVGTCERAHQSKQLYIVIDRFSF-------TEPLLPIIEFFVDHKTYWKDGKLCNSDAQIRM 1689

  Fly  2130 ----DREKLYW----KEILDVVLGCACAPPGGGRNPLTPRFVRHFALFSLPKPNEETL------T 2180
                |.|...|    |.:....:|.|.        |.:.:|...       ||..::|      .
 Worm  1690 IIITDEEDYAWLHKTKALASTFVGIAM--------PASTKFKDQ-------KPLVQSLIAANFTA 1739

  Fly  2181 QIFNGILRGFLQTFSSA-VRALSEPMVNACVDVYMRVATVMLPTPDKSHYIFNLRDLSKCIQGIL 2244
            :.|:......|::|||. |..:.:|.|.       .::::.|.|.....:.|...|  .|     
 Worm  1740 KSFSSEYHHILESFSSCIVEIVRKPYVE-------NLSSMALATRLAKSFFFAFPD--NC----- 1790

  Fly  2245 QASNLHYNQENQILRLFYHETTRVFHDRLINIE------------DKNI---FKALMKEVCMDHF 2294
                   ...:.:||||.||:.||..|.:..|.            |:|.   |:|::|.:..   
 Worm  1791 -------PDPDALLRLFIHESARVIGDAIDPIHRATFAQQFETLIDENFNTAFQAILKHIAQ--- 1845

  Fly  2295 NRPVINDNEPPILFGDFMVFGKPKNERIYDEIRDHTKLESVLNDYIADYNSVAVGKQMKLILFQD 2359
               :..:.|........|.......:.||.|:..|..::.:..:.:.|  .|...:.::..||:.
 Worm  1846 ---ISEEEEEEEGVEKRMTASLDMFDLIYSEVDAHDVVDGLAYEPVVD--RVQFQRSIENFLFEH 1905

  Fly  2360 AMEHT----------------VRLARLLRSDRGNGLLVGVAGMGKQSLTRLA--------SHVN- 2399
            ...||                .|:.|::|....:.:|......|:..:.:.|        .|:. 
 Worm  1906 HRNHTKDRVRLFVDWETSGWVQRVMRVIRQASEHMVLTAPPNSGRTQVVKAACVACNATMMHMQV 1970

  Fly  2400 EYNCWQIEMRR-NYDLNAFHEDLRVLYRIAGIDNQPVTFLLID--SQIVEEEFLEDINNILNSGE 2461
            :..|:...:.| .|.|:      |.:..||..:...|..:.:|  .:.||..::|.|...:....
 Worm  1971 DATCYDTFISRWEYALS------RAINIIANTNQHVVILVHLDFCYEKVEPRWMEQIKLWIECPN 2029

  Fly  2462 VPNLFEGDEF----EKII----------------LDARDGCN----ENRKDDPCTRDDIYKFFIN 2502
            ..:|...::.    |::|                |..:..|.    |..|:....|    |....
 Worm  2030 TQHLVSDEQLHTMGEQLIECEKNLATQMQTIGLRLPGQRMCKYLPVETLKEPQALR----KVLEA 2090

  Fly  2503 RVRNNLHVVMSMSPVGDAFRRRCRMFPSLVNCTTIDWFTSWPTEAL-YSVALGLLTKIAP--KME 2564
            |:.:.|||:..:.|   .|:            |...|.|.:....: .|..|..::||..  |::
 Worm  2091 RIFDALHVMFLVDP---QFK------------TDFSWCTIFHVPTIEKSELLSKVSKIISDCKVD 2140

  Fly  2565 DRISLASTTVFMHKTVEDASVKFYKEMKRHYYTTPSSYL-ELLKLYQNLLKIKNMEIIAKRKRIA 2628
            :...:..:|.|:.|       |:.:.:....|.|..|.| |:...:|.:.:.:..|::|:..|  
 Worm  2141 EAAQIIVSTFFIVK-------KYLQSIGIALYGTVFSQLFEVADCFQIVFREQKKELVAEGTR-- 2196

  Fly  2629 NGLNKLLETNEVI---AVMGKELEVMVPQ--LDEKSAMMKSLVDNLTKETKQAD--------AVK 2680
              ||:.|.|.|.|   |.||||:::...|  :.||..|:..:  |..:.||.|.        |||
 Worm  2197 --LNEALHTCEQIEKLAEMGKEVDIEAVQRRIVEKETMLSKM--NRERNTKGARMEVLSELVAVK 2257

  Fly  2681 QSVLEDEMNAKEKA------AVAQAISEDAGKDLEIAMPALREAEEALKGLTKADINELKSFTTP 2739
            .:.|| .|.|:|.|      |:..|..|:           .|:..|.|...:..||..|...|.|
 Worm  2258 ATNLE-TMRAEEAALKTTVEAMVSAPQEE-----------FRKCVEELLKFSNTDIKTLSKITKP 2310

  Fly  2740 PALVQFCMEAVCILL--GVKP------TWASAKAIMADINFIKRLFEYDKEHMKEDTLKKVKKYI 2796
            ...::.|.|.:..:.  ..||      .|..:...::|..|..:|...|.:.:..|.:|.:|||:
 Worm  2311 SVGIRLCCEMLRTIFEPNFKPKRHAAEAWTESLKFVSDKAFFIKLATCDADILTVDQMKVLKKYV 2375

  Fly  2797 DHKDFVPAKFEKVSKVAKSMSMWVISMDKFSKVYKVVEPKIKRKEAAEAELKEVMTVLRQKQKEL 2861
            |..:|...|.|..|.|...:..|:.:..:.:...:|:|.:::       |.||:...:||.:...
 Worm  2376 DRAEFNANKIEHESVVCACLCRWIGAFLELACTLRVMEEQVE-------ESKELREHIRQTEVRF 2433

  Fly  2862 AAVEAKIQGLRDSLEE-----KQREFQVIQDNVDLTYGRINRAGRLTSALSDEQVRWRETVKSLT 2921
            ....:::|.|:..:|:     ::.| ||:.::..|...|: |:|.|.:||...:.||:..:|...
 Worm  2434 ENESSEMQQLKSDVEKLTVLIRENE-QVLANDRRLCDYRL-RSGDLLAALEPHRKRWKSQLKQNE 2496

  Fly  2922 GDLACVPGDVLVAAACVAYLGAFSHEYRRDMSALWVSKCREHKIPSSPEFNLLKVLGDPYEMRQW 2986
            .....:.|:.|:.|...|:|..    ..:.::.:.||.|..|                       
 Worm  2497 KKQKELVGNTLLFAIHRAHLLC----QEKAVTLICVSMCTSH----------------------- 2534

  Fly  2987 NVDGLPKDNISIENGIYATRALRWALMIDPQEQANRWIRNMERANNLQV-IKMTDSTMMRVLENA 3050
                |...|:..::.           |.......||.:|.::.:....: :..|||.:..|  .:
 Worm  2535 ----LTSQNVQFDSS-----------MASSSNVINRILRTLKSSRRFCLFLSTTDSLLQNV--RS 2582

  Fly  3051 VRQGYPVLLEEINETI---DPSLRPILQRETYRFEGRTYLKLGDMVIDYDDNFKLYMTTKLPNPH 3112
            |..|...|  :|:..:   :|.:...||:..|......:                |..|::|.|.
 Worm  2583 VLPGATYL--DISPPLTWKEPQMAVSLQKHVYSIVPTVF----------------YNLTEVPPPE 2629

  Fly  3113 YL--------PEVCI--------NVTLVNFLVTESG-LEDQL--LADIVAIELP------AMEIQ 3152
            ..        .|||.        :..|..|:....| :.||:  |.:::.:.:|      ..:|:
 Worm  2630 MYEILMKSEEKEVCYHNKPLELPDDILFVFVAKNLGHIPDQIRKLMEVIVVSIPLEPIEDREKIE 2694

  Fly  3153 RNDL 3156
            ||:|
 Worm  2695 RNEL 2698

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dhc16FNP_523394.1 DHC_N2 829..1234 CDD:462462 71/430 (17%)
DYN1 1047..3704 CDD:227570 436/2375 (18%)
AAA_6 1373..1699 CDD:463697 44/342 (13%)
Dynein_C 3750..4073 CDD:465677
dhc-4NP_001338793.1 DHC_N2 599..992 CDD:462462 83/535 (16%)
Blue background indicates that the domain is not in the aligned region.

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