DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dhc16F and LOC100488188

DIOPT Version :10

Sequence 1:NP_523394.1 Gene:Dhc16F / 32785 FlyBaseID:FBgn0283476 Length:4081 Species:Drosophila melanogaster
Sequence 2:XP_031752833.1 Gene:LOC100488188 / 100488188 XenbaseID:XB-GENE-29079095 Length:5275 Species:Xenopus tropicalis


Alignment Length:63 Identity:17/63 - (26%)
Similarity:27/63 - (42%) Gaps:17/63 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 ETYLKIIQKFWSTLICIKSQRSLIGGFT-------FGELVYVLPKFKAQKLEDLRLDMCQKIN 178
            |..||.:|..|..  ..::||:|....|       ||:::|        :.|.:.|.|.|.:|
 Frog   154 EKLLKKMQSLWEK--ACENQRNLNVETTRISHWKAFGDILY--------RSESVLLHMPQPLN 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dhc16FNP_523394.1 DHC_N2 829..1234 CDD:462462
DYN1 1047..3704 CDD:227570
AAA_6 1373..1699 CDD:463697
Dynein_C 3750..4073 CDD:465677
LOC100488188XP_031752833.1 DHC_N1 180..809 CDD:462457 8/35 (23%)
DHC_N2 1339..1819 CDD:462462
AAA_6 2047..2442 CDD:463697
Dynein_AAA_lid 2598..2724 CDD:465532
AAA_7 2739..2909 CDD:463698
AAA_lid_1 2956..3044 CDD:465535
AAA_8 3127..3366 CDD:463701
MT 3415..3744 CDD:463699
AAA_9 3859..4047 CDD:463702
Dynein_C 4767..5049 CDD:465677
Blue background indicates that the domain is not in the aligned region.

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