DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6867 and myoc

DIOPT Version :10

Sequence 1:NP_573262.2 Gene:CG6867 / 32782 FlyBaseID:FBgn0030887 Length:949 Species:Drosophila melanogaster
Sequence 2:NP_001015062.1 Gene:myoc / 548602 ZFINID:ZDB-GENE-050425-2 Length:474 Species:Danio rerio


Alignment Length:358 Identity:87/358 - (24%)
Similarity:147/358 - (41%) Gaps:70/358 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   624 PQDPNSETP---YVGNNMKVYGQRPPESECPVCD---QCPDPSLYQCKDSILNNF---------E 673
            ||..||..|   :|.:|:......|.|.:..:.|   |..:|. ||...:::...         :
Zfish   147 PQKDNSFRPGSGHVPSNLASRPGNPQEDKSSLRDPAWQYSNPG-YQELTAVVTEVTAPNQDGPAD 210

  Fly   674 IQATGNLSYPGLPKRPKTCYLYAVGKPVFHKVVNE---KFGSWLRDPSPDSDREKTFVTNENDPY 735
            |...|:|.:              |..|..|:..:.   |:|.|::||            ...:||
Zfish   211 ISGCGDLVW--------------VENPEVHRKADSIAGKYGVWMQDP------------EAKEPY 249

  Fly   736 ----------------NLFEFTTRIQYRMNSIPRRKYEIQEGFHGNAHVVFNGSFYYQQRNSDLV 784
                            .||.:....|. ....|.:...:.|........::.||.|||:|.|..:
Zfish   250 GPDMVWRIDSVGSEVRQLFGYENMDQL-TRGFPTKVLLLPESVESTGATMYKGSLYYQRRLSRTL 313

  Fly   785 VKLDLTSLKKITTQ--LPYAGVAAANRLYTTDYNYMDFNVDEVGLWVIYSTYNSNNTLV-AKLDA 846
            ::.||.: :.|..:  ||:||...........|..:|..:||.|||.||||..:...:| ::||.
Zfish   314 IRYDLHA-ESIAARRDLPHAGFHGQFPYSWGGYTDIDLAIDENGLWAIYSTNKAKGAIVISQLDP 377

  Fly   847 ETLKMQYNFNITLDHHQFGEMFIVCGNLYAIDSGTDKNTQIRYVVD--LYKGKLLNTNLPFSNPF 909
            ..|:::..:...:........|::||.||.:.|.|..||.:.|:.|  ..:||.:  ::||.|.:
Zfish   378 HNLEVKGTWETKIRKTSVANAFMICGKLYTVASYTSPNTTVNYMFDTATSQGKAI--SVPFKNRY 440

  Fly   910 SHTTTVGYNPLTVELYSWDKGNALTYPIRYNEQ 942
            .:.:.|.||....:||:||....::|.:|..:|
Zfish   441 RYNSMVDYNSAKRKLYAWDNYYMVSYSVRLGKQ 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6867NP_573262.2 gly_rich_SclB <257..>409 CDD:468478
Ig 436..525 CDD:472250
Ig strand B 453..457 CDD:409353
Ig strand C 466..470 CDD:409353
Ig strand E 490..494 CDD:409353
Ig strand F 504..509 CDD:409353
Ig strand G 518..521 CDD:409353
Ig_3 529..611 CDD:464046
OLF 694..939 CDD:460482 68/268 (25%)
myocNP_001015062.1 ZapB <101..>134 CDD:442308
PRK13729 103..>187 CDD:184281 11/39 (28%)
OLF 217..470 CDD:460482 69/282 (24%)
Blue background indicates that the domain is not in the aligned region.

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