DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6867 and Lac

DIOPT Version :9

Sequence 1:NP_573262.2 Gene:CG6867 / 32782 FlyBaseID:FBgn0030887 Length:949 Species:Drosophila melanogaster
Sequence 2:NP_523713.2 Gene:Lac / 36363 FlyBaseID:FBgn0010238 Length:359 Species:Drosophila melanogaster


Alignment Length:207 Identity:66/207 - (31%)
Similarity:95/207 - (45%) Gaps:22/207 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   430 PPSITDIQVPDFQRTVIVEEGRSLNLSCTATGTPTPQVEWRREDGRTINVNGVEMASISGQFLRF 494
            ||.|:|    :..::|:..||..:.:.|.|:|.|||.:.||||:...:   ..:.|:..|..||.
  Fly   134 PPVISD----NSTQSVVASEGSEVQMECYASGYPTPTITWRRENNAIL---PTDSATYVGNTLRI 191

  Fly   495 TNITRHQMAAYTCFANNGIAPVANATYLVEVQFAPMISVYRQMIYAEYQSSATLECLVEAFPEAI 559
            .::.:.....|.|.|:||::........|||:|||:|:|.|..:....|....|||.:||:|...
  Fly   192 KSVKKEDRGTYYCVADNGVSKGDRRNINVEVEFAPVITVPRPRLGQALQYDMDLECHIEAYPPPA 256

  Fly   560 RYWERAYDGKILDPSDKYGIESYPEGFKTTMRLTISNLR-----KDDFGYYHCVARN---ELNAT 616
            ..|.:  |...|..:..|.|..    |.|....|.|.||     |..:|.|.|.|.|   |..|.
  Fly   257 IVWTK--DDIQLANNQHYSISH----FATADEYTDSTLRVITVEKRQYGDYVCKATNRFGEAEAR 315

  Fly   617 MVNFE-IAPQDP 627
            :..|| |.|..|
  Fly   316 VNLFETIIPVCP 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6867NP_573262.2 Collagen 306..364 CDD:189968
IG_like 442..525 CDD:214653 23/82 (28%)
IGc2 449..511 CDD:197706 19/61 (31%)
IG_like 544..612 CDD:214653 23/75 (31%)
Ig 546..612 CDD:143165 23/73 (32%)
OLF 694..937 CDD:280371
LacNP_523713.2 IG_like 36..131 CDD:214653
FR1 37..50 CDD:409353
Ig strand A' 37..42 CDD:409353
Ig strand B 44..51 CDD:409353
CDR1 51..59 CDD:409353
Ig strand C 59..63 CDD:409353
FR2 60..63 CDD:409353
CDR2 67..81 CDD:409353
Ig strand C' 68..72 CDD:409353
Ig strand C' 79..81 CDD:409353
FR3 84..115 CDD:409353
Ig strand D 84..90 CDD:409353
Ig strand E 94..102 CDD:409353
Ig strand F 108..115 CDD:409353
CDR3 116..124 CDD:409353
FR4 124..130 CDD:409353
Ig strand G 124..130 CDD:409353
Ig_3 134..208 CDD:404760 24/80 (30%)
Ig strand B 153..157 CDD:409353 0/3 (0%)
Ig strand C 166..170 CDD:409353 0/3 (0%)
Ig strand E 187..191 CDD:409353 1/3 (33%)
Ig strand F 201..206 CDD:409353 2/4 (50%)
Ig strand G 215..218 CDD:409353 0/2 (0%)
Ig 227..318 CDD:416386 29/96 (30%)
Ig strand C 256..260 CDD:409353 0/3 (0%)
Ig strand E 286..290 CDD:409353 2/3 (67%)
Ig strand F 300..305 CDD:409353 2/4 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D265311at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.920

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