DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6867 and DIP-eta

DIOPT Version :9

Sequence 1:NP_573262.2 Gene:CG6867 / 32782 FlyBaseID:FBgn0030887 Length:949 Species:Drosophila melanogaster
Sequence 2:NP_001188701.2 Gene:DIP-eta / 33793 FlyBaseID:FBgn0031725 Length:450 Species:Drosophila melanogaster


Alignment Length:216 Identity:83/216 - (38%)
Similarity:118/216 - (54%) Gaps:13/216 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   426 DLLIPPSITDIQVPDFQRTVIVEEGRSLNLSCTATGTPTPQVEWRREDGRTINV-NGVEMASISG 489
            |:::||.|.|...   ...::|.||.::.|.|.|||:|.|.:.||||.|..|.: .|.|:.||.|
  Fly   140 DVVVPPDILDYPT---STDMVVREGSNVTLKCAATGSPEPTITWRRESGVPIELATGEEVMSIEG 201

  Fly   490 QFLRFTNITRHQMAAYTCFANNGIAPVANATYLVEVQFAPMISVYRQMIYAEYQSSATLECLVEA 554
            ..|...|:.||.|.||.|.|:||:.|..:....:.|.|.|||:|..|:|.|......||:|..||
  Fly   202 TDLVIPNVRRHHMGAYLCIASNGVPPSVSKRITLVVHFPPMITVQNQLIGAVEGKGVTLDCESEA 266

  Fly   555 FPEAIRYWERAYDGKILDPSDKYGIE-SYPEGFKTTMRLTISNLRKDDFGYYHCVARNEL---NA 615
            :|::|.||.|. .|:|:.|..||... :...|::.:|||.|:.|.:.:||.|.|||:|.|   :.
  Fly   267 YPKSINYWTRE-RGEIVPPGGKYSANVTEIGGYRNSMRLHINPLTQAEFGSYRCVAKNSLGDTDG 330

  Fly   616 TMVNFEIAPQDPNSETPYVGN 636
            |:..:.|.|...|    ||.|
  Fly   331 TIKLYRIPPNAVN----YVEN 347

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG6867NP_573262.2 Collagen 306..364 CDD:189968
IG_like 442..525 CDD:214653 33/83 (40%)
IGc2 449..511 CDD:197706 29/62 (47%)
IG_like 544..612 CDD:214653 27/68 (40%)
Ig 546..612 CDD:143165 27/66 (41%)
OLF 694..937 CDD:280371