DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6867 and Gldn

DIOPT Version :9

Sequence 1:NP_573262.2 Gene:CG6867 / 32782 FlyBaseID:FBgn0030887 Length:949 Species:Drosophila melanogaster
Sequence 2:NP_852047.2 Gene:Gldn / 315675 RGDID:727879 Length:549 Species:Rattus norvegicus


Alignment Length:785 Identity:174/785 - (22%)
Similarity:244/785 - (31%) Gaps:318/785 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 GKRMRRDIA--------SSAPASMHADPLIEFFNP-----NHRKVLEEQDTEIRKRTGQKGAAPG 227
            |:..|.|.|        |.|||.:...|.    :|     |.|....|..:.||..:        
  Rat    56 GREQREDSALRAFLAELSRAPARVPEPPQ----DPMSAARNKRSHGGEPASHIRAES-------- 108

  Fly   228 GDEWIYLNTYCRVPEKIITGFCKGTQDYCPPAPQGPTGEVGPKGPPGNPGLPGIPGPKGNRGDVG 292
             .:.:.:.||..||.:::...|..||..|         ..||.||||.||..|:||..|:.|..|
  Rat   109 -QDMMMMMTYSMVPIRVMIDLCNSTQGIC---------LTGPPGPPGPPGAGGLPGHNGSDGQPG 163

  Fly   293 LPGAPGVDGVGHLGPAGPRGPKGDAGATGRAGLDGRDGVPGEPGLDGVPGRAGADGKNGLPGRDG 357
            |              .||:|.||..|..|:.||.|..|.|||.|..|..|..|..|..|.||:.|
  Rat   164 L--------------QGPKGEKGAVGKRGKMGLPGATGNPGEKGEKGDAGELGLPGNEGPPGQKG 214

  Fly   358 KDGLHGKDGKDGLSITGPKGAQGPPGERGLKGIAGPRGRPGKPGTNGIPGVPGINAWKLQYPNGS 422
            ..|..|....|.| :||.||.|||||.      .||.|.||.||:....|.        :.||. 
  Rat   215 DKGDKGDVSNDVL-LTGAKGDQGPPGP------PGPPGPPGPPGSRRAKGP--------RQPNS- 263

  Fly   423 SSNDLLIPPSITDIQVPDFQRTVIVEEGRSLNLSCTATGTPTPQVEWRREDGRTINVNGVEMASI 487
                                                                             
  Rat   264 ----------------------------------------------------------------- 263

  Fly   488 SGQFLRFTNITRHQMAAYTCFANNGIAPVANATYLVEVQFAPMISVYRQMIYAEYQSSATLECLV 552
                  |||    |....||..                                           
  Rat   264 ------FTN----QCPGETCVI------------------------------------------- 275

  Fly   553 EAFPEAIRYWERAYDGKILDPSDKYGIESYPEGFKTTMRLTISNLRKDDFGYYHCVARNELNATM 617
                                                                             
  Rat   276 ----------------------------------------------------------------- 275

  Fly   618 VNFEIAPQDPNSETPYVGNNMKVYGQRPPESECPVCDQCPDPSLYQCKDSILNNFEIQATGNLSY 682
                     ||.:|.....:.||..:..|::| |:                              
  Rat   276 ---------PNDDTLVGRADEKVNERHSPQTE-PM------------------------------ 300

  Fly   683 PGLPKRPKTCYLYAVGKPVFHKVVNEKFGSWLRDPSPDSDREKTFVTNENDPYNLFEFTTRIQYR 747
                       :.::|.|.....|.|.||:|||:.:..|| ::.:||.......:.||.. :...
  Rat   301 -----------ITSIGNPAQVLKVKETFGTWLRESANRSD-DRIWVTEHFSGIMVKEFED-LPAL 352

  Fly   748 MNS------IPRRKYEIQEGFHGNAHVVFNGSFYYQQRNSDLVVKLDLTSLKKITTQLPYAGVAA 806
            :||      :|..       |||..|.|:|.|.||.:..|:.:|:.:.......|.:|..|....
  Rat   353 LNSSFTLLHLPHY-------FHGCGHAVYNNSLYYHKGGSNTIVRFEFGKETPQTLKLEDALYFD 410

  Fly   807 ANRLYTTDYNYMDFNVDEVGLWVIY-STYNSNNTLVAKLDAETLKMQYNFNITLDHHQFGEMFIV 870
            ...|:.....|.:..|||.|||:|| |:.:.::.|||:||..|..:..:.|.|....:.|..||.
  Rat   411 RKYLFANSKTYFNIAVDEKGLWIIYASSVDGSSILVAQLDERTFSVLQHINTTYPKSKAGNAFIA 475

  Fly   871 CGNLYAIDSGTDKNTQIRYVVDLYKGKLLNTNLPFSNPFSHTTTVGYNPLTVELYSWDKGNALTY 935
            .|.||..|:   |:|::.:..||.:||.:|.|.......|....:.||.....||||:.|:.:.|
  Rat   476 QGILYVTDT---KDTRVTFAFDLLRGKQINANFGLRMSQSVLAMLSYNMRDQHLYSWEDGHLMLY 537

  Fly   936 PIRYN 940
            |:.::
  Rat   538 PVHFS 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6867NP_573262.2 Collagen 306..364 CDD:189968 24/57 (42%)
IG_like 442..525 CDD:214653 6/82 (7%)
IGc2 449..511 CDD:197706 6/61 (10%)
IG_like 544..612 CDD:214653 0/67 (0%)
Ig 546..612 CDD:143165 0/65 (0%)
OLF 694..937 CDD:280371 75/249 (30%)
GldnNP_852047.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 74..107 10/36 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 137..276 67/360 (19%)
Collagen 157..220 CDD:396114 28/76 (37%)
OLF 301..539 CDD:396664 75/249 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3545
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 224 1.000 Inparanoid score I3429
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23192
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.960

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