DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6867 and Olfm4

DIOPT Version :10

Sequence 1:NP_573262.2 Gene:CG6867 / 32782 FlyBaseID:FBgn0030887 Length:949 Species:Drosophila melanogaster
Sequence 2:NP_001099522.1 Gene:Olfm4 / 290409 RGDID:1311708 Length:511 Species:Rattus norvegicus


Alignment Length:559 Identity:116/559 - (20%)
Similarity:205/559 - (36%) Gaps:115/559 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   420 NGSSSNDLLIPPSITDIQVPDFQRTVIVEEGRSLNLSCTATGTPTPQVEWRREDGR--------- 475
            :.|.|:..|......::..|....|.:.|        .|....|:....| .|.|.         
  Rat    17 SASGSSRALSSTHSLELTTPTLPETTLPE--------TTTAWLPSGGTSW-TEGGTLSQSLSNFT 72

  Fly   476 -TINVNGVEMASISGQFLRF--TNITRHQMAAYTCFANNGIAPVANATYLVEVQFAPMISVYRQM 537
             :::.:|....|:|.....|  ..:.|.:..|:|      ::......:....::..:||||.:.
  Rat    73 GSVDSHGTCQCSVSLPDTTFPADRVERLEFTAHT------LSQKFEREFSKVKEYVQLISVYEKK 131

  Fly   538 IYAEYQSSATLECLVEAF-PEAIRYWERAYDGKILDPSDKYGIESYPEGFKTTMRLTISNLRKDD 601
            :       ..|...||.. .::|.|.|..::...|:..:              |...:..|:::.
  Rat   132 L-------LNLTVRVEVMEKDSISYTELDFELIKLEVKE--------------MHKLVIQLKENF 175

  Fly   602 FGYYHCVARNEL---NATMVNFEIAPQDPNSETPYVGNNMKVYGQRPPESECP------VCDQCP 657
            .|....:...|:   |.|::..::...|.|:   .:....::...:....||.      |....|
  Rat   176 VGSTDIIDMLEVEIRNMTLLVEKLETLDQNN---VLSIRRQILALKTKLKECEDSKSGLVPATPP 237

  Fly   658 DPSLYQCKDSILNNFEIQATGNLSYPGLPKRPKTCYLYAVGKPVFHKVVNEKFGSWLRDPSPD-S 721
            .|:...|....:.|........|::.|.                     |.|:|:|.||.||. .
  Rat   238 PPAPGSCSHGGVVNISAPFVVQLNFQGF---------------------NYKYGAWGRDYSPQHP 281

  Fly   722 DREKTFVTNENDPYNLFEFTTRIQYRM-NSIPR-------RKYEIQEGFHGNAHVVFNGSFYYQQ 778
            :|...:|...|....:.|:     ||: :|:..       |:|.|..| .|...|.||.|.|...
  Rat   282 ERTLYWVAPLNTDARVLEY-----YRLYDSLDNLLLYSHSRQYRILYG-QGGGTVAFNNSLYVNW 340

  Fly   779 RNSDLVVKLDLTSLKKITTQLPYAGVAAANRLYTTDYNYMDFN--VDEVGLWVIYST-YNSNNTL 840
            .|...:.|:|||: ..:|...|....|..||....:.|:.|.:  |||..||.||:| .::.|.:
  Rat   341 YNGRNIAKIDLTT-NGVTVNQPLPQAAYNNRFSYANVNWQDIDLAVDEQALWAIYATEASTGNIV 404

  Fly   841 VAKLDAETLKM-------QYNFNITLDHHQFGEMFIVCGNLYAIDSGTDKNTQIRYVVDLYKGKL 898
            ::||:..||::       ||..:::       ..|||||.|||..:...:..:|.|..|....:.
  Rat   405 ISKLNDTTLEVISTWVTKQYKPSVS-------NAFIVCGVLYATRTLNTRTEEIFYYYDTNTQRE 462

  Fly   899 LNTNLPFSNPFSHTTTVGYNPLTVELYSWDKGNALTYPI 937
            .:..:..........::.|:|...:||.::.|..|.|.:
  Rat   463 GSLAITMRKMQERIQSINYHPYDHKLYVYNDGYLLNYDL 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6867NP_573262.2 gly_rich_SclB <257..>409 CDD:468478
Ig 436..525 CDD:472250 15/100 (15%)
Ig strand B 453..457 CDD:409353 0/3 (0%)
Ig strand C 466..470 CDD:409353 0/3 (0%)
Ig strand E 490..494 CDD:409353 0/3 (0%)
Ig strand F 504..509 CDD:409353 2/4 (50%)
Ig strand G 518..521 CDD:409353 0/2 (0%)
Ig_3 529..611 CDD:464046 14/82 (17%)
OLF 694..939 CDD:460482 70/263 (27%)
Olfm4NP_001099522.1 OLF 249..503 CDD:460482 73/288 (25%)
Blue background indicates that the domain is not in the aligned region.

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