DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6867 and Ntm

DIOPT Version :9

Sequence 1:NP_573262.2 Gene:CG6867 / 32782 FlyBaseID:FBgn0030887 Length:949 Species:Drosophila melanogaster
Sequence 2:NP_001344522.1 Gene:Ntm / 235106 MGIID:2446259 Length:367 Species:Mus musculus


Alignment Length:206 Identity:62/206 - (30%)
Similarity:95/206 - (46%) Gaps:22/206 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   429 IPPSITDIQVPDFQRTVIVEEGRSLNLSCTATGTPTPQVEWRREDGRTINVNGVEMASISGQFLR 493
            :.|.|.:|     ...:.:.||.:::|:|.|||.|.|.|.||.     |:...|...| ..::|.
Mouse   134 VSPKIVEI-----SSDISINEGNNISLTCIATGRPEPTVTWRH-----ISPKAVGFVS-EDEYLE 187

  Fly   494 FTNITRHQMAAYTCFANNGIAPVANATYLVEVQFAPMISVYRQMIYAEYQSSATLECLVEAFPEA 558
            ...|||.|...|.|.|:|.:|........|.|.:.|.||..:.......| ..||:|...|.|.|
Mouse   188 IQGITREQSGEYECSASNDVAAPVVRRVKVTVNYPPYISEAKGTGVPVGQ-KGTLQCEASAVPSA 251

  Fly   559 IRYWERAYDGKILDPSDKYGIESYPEGFKTTMRLTISNLRKDDFGYYHCVARNEL---NATMVNF 620
            ...|.:. |.::::......:|:.|    ...:||..|:.:.|:|.|.|||.|:|   ||:::.|
Mouse   252 EFQWFKD-DKRLVEGKKGVKVENRP----FLSKLTFFNVSEHDYGNYTCVASNKLGHTNASIMLF 311

  Fly   621 EIAPQDPNSET 631
            |:  .:|.|.|
Mouse   312 EL--NEPTSST 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6867NP_573262.2 Collagen 306..364 CDD:189968
IG_like 442..525 CDD:214653 26/82 (32%)
IGc2 449..511 CDD:197706 23/61 (38%)
IG_like 544..612 CDD:214653 19/67 (28%)
Ig 546..612 CDD:143165 19/65 (29%)
OLF 694..937 CDD:280371
NtmNP_001344522.1 Ig 44..132 CDD:416386
Ig strand A' 44..49 CDD:409353
Ig strand B 51..59 CDD:409353
CDR1 59..63 CDD:409353
FR2 64..70 CDD:409353
Ig strand C 64..70 CDD:409353
CDR2 71..83 CDD:409353
Ig strand C' 72..76 CDD:409353
Ig strand C' 80..83 CDD:409353
FR3 84..118 CDD:409353
Ig strand D 87..94 CDD:409353
Ig strand E 97..103 CDD:409353
Ig strand F 110..118 CDD:409353
CDR3 119..123 CDD:409353
Ig strand G 123..132 CDD:409353
FR4 125..132 CDD:409353
Ig_3 136..205 CDD:404760 26/79 (33%)
Ig strand A' 144..148 CDD:409353 0/3 (0%)
Ig strand B 151..160 CDD:409353 2/8 (25%)
Ig strand F 197..205 CDD:409353 3/7 (43%)
Ig_3 222..299 CDD:404760 23/82 (28%)
putative Ig strand A 223..229 CDD:409353 3/5 (60%)
Ig strand B 239..243 CDD:409353 2/3 (67%)
Ig strand C 252..256 CDD:409353 0/3 (0%)
Ig strand E 278..282 CDD:409353 1/3 (33%)
Ig strand F 292..297 CDD:409353 2/4 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 49 1.000 Domainoid score I11709
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D265311at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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