DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6867 and cof-2

DIOPT Version :9

Sequence 1:NP_573262.2 Gene:CG6867 / 32782 FlyBaseID:FBgn0030887 Length:949 Species:Drosophila melanogaster
Sequence 2:NP_491804.2 Gene:cof-2 / 183582 WormBaseID:WBGene00000583 Length:486 Species:Caenorhabditis elegans


Alignment Length:595 Identity:125/595 - (21%)
Similarity:194/595 - (32%) Gaps:219/595 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   358 KDGLHGKDGKDGLSITGPKGAQGPPGERGLKGIAGPRGR------PGKPGTNGIPGVPGINAWKL 416
            :|.:.||        .||.|..||||:   .|.|||:||      ||.||..|.||..|.:|...
 Worm    87 QDDVRGK--------PGPVGPVGPPGK---SGPAGPQGRRGLMGIPGHPGPVGPPGNIGKDADCS 140

  Fly   417 QYPNGSSSNDLLIP-----PSITDIQVPDFQRTVIVEEGRSLNLSCTATGTPTPQVEWRREDGRT 476
            ..|   ..::||:.     |:|.:::.|              |.....| ||.|.|         
 Worm   141 SCP---IRDELLMEREFKCPTIENLECP--------------NREAIPT-TPWPSV--------- 178

  Fly   477 INVNGVEMASISGQFLRFTNITRHQMAAYTCFANNGIAPVANATYLVEVQFAPMISVYRQMI--Y 539
                                  .||                           ||..:.:|::  |
 Worm   179 ----------------------THQ---------------------------PMPGLVQQILSNY 194

  Fly   540 AEYQSSATLECLVEAFPEAIRYWERAYDGKILDPSDKYGIESYPEGFKTTMRLTISNLRKDDFGY 604
            :|.:.     |                                       :::.:.|...|:   
 Worm   195 SEVEG-----C---------------------------------------VKICLKNYTLDE--- 212

  Fly   605 YHCVARNELNATMVNFEIAPQDPNSETPYVGNNMKVYGQRPPESECPVCDQCPDPSLYQCKDSIL 669
                   |:..|:..                                       |..|       
 Worm   213 -------EIEETITT---------------------------------------PVAY------- 224

  Fly   670 NNFEIQATGNLSYPGLPKRPKTCYLYAVGKPVFHKVVNEKFGSWLRD--PSPDSDREKTFVTNEN 732
                ||..           ...|.|..|||||||......:|||:||  |....|..|.:|.|..
 Worm   225 ----IQGV-----------TAHCRLQNVGKPVFHSHSTTYYGSWMRDAYPPTGDDARKRYVMNHF 274

  Fly   733 DPYNLFEFTTRIQYRMNSIPRRKYEIQEGFHGNAHVVFNGSFYYQQRNSDLVVKLDLTSLKKITT 797
            ..:.|.||....:.|.:.: .:.:.:...|.|..||:||.|.:||:....::.|.:..|.:....
 Worm   275 QGHELIEFRNEAEMRRDHV-GKVHRLPYIFDGTNHVIFNASLFYQRAGYPIIAKYEFNSKQYSQF 338

  Fly   798 QLPYAGVAAANRLYTTDYNYMDFNVDEVGLWVIYSTYNSNNTLVAKLDAETLKMQYNFNI-TLDH 861
            ::|.|.......||....||.|..:||..|||::.........|||:|...|.:...||: |::|
 Worm   339 EIPGAAYRGDQYLYNNSMNYFDLAIDENALWVMFHYQEEAFLSVAKVDINNLTIYEAFNLTTVNH 403

  Fly   862 HQFGEMFIVCGNLYAIDSGTDKNTQIRYVVDLYKGKLLNTNLPFSNPFSHTTTVGYNPLTVELYS 926
            .......:|||.:|.::|.::::|.|....|.|:.......:.:.|.:.:...:.||.....:|.
 Worm   404 TDVANGIVVCGTIYLVESASEQSTYISTAYDFYRNTYSQPLIKWINLYKNANMISYNAYDKRIYI 468

  Fly   927 WDKGNALTYP 936
            :|.|..|:.|
 Worm   469 YDHGYMLSVP 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6867NP_573262.2 Collagen 306..364 CDD:189968 1/5 (20%)
IG_like 442..525 CDD:214653 8/82 (10%)
IGc2 449..511 CDD:197706 8/61 (13%)
IG_like 544..612 CDD:214653 3/67 (4%)
Ig 546..612 CDD:143165 3/65 (5%)
OLF 694..937 CDD:280371 71/246 (29%)
cof-2NP_491804.2 OLF 234..478 CDD:366968 70/244 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 128 1.000 Domainoid score I3308
eggNOG 1 0.900 - - E1_KOG3545
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 181 1.000 Inparanoid score I2654
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0010002
OrthoInspector 1 1.000 - - otm14138
orthoMCL 1 0.900 - - OOG6_112827
Panther 1 1.100 - - LDO PTHR23192
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3311
SonicParanoid 1 1.000 - - X205
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.890

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