DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6867 and LOC108179145

DIOPT Version :9

Sequence 1:NP_573262.2 Gene:CG6867 / 32782 FlyBaseID:FBgn0030887 Length:949 Species:Drosophila melanogaster
Sequence 2:XP_017209730.1 Gene:LOC108179145 / 108179145 -ID:- Length:327 Species:Danio rerio


Alignment Length:288 Identity:75/288 - (26%)
Similarity:122/288 - (42%) Gaps:59/288 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   689 PKTCYLYAVGKPVFHKVVNEKFGSWLRDPSP---DSDREKTFVTNENDPYNLF-----EFTTRI- 744
            |||..|...|       .:..||:|.||.:|   |.::....|.:.::.|..|     ..:|.| 
Zfish    62 PKTYSLTVYG-------TSYTFGAWGRDANPAPGDENKYWLVVLSSSNVYGNFIRQYNSLSTIIL 119

  Fly   745 ------QYRMNSIPRRKYEIQEGFHGNAHVVFNGSFYYQQRNSDLVVKLDLTSLKKITTQLPYAG 803
                  .|..:|.|... .||    |...|::..:.||...|:..|.:.:||:....|..||  .
Zfish   120 GIDPTDTYISSSNPTTN-TIQ----GPNMVMYGNALYYNCYNTYSVCQFNLTTQSVSTVALP--N 177

  Fly   804 VAAANRLYT-----TDYNY--MDFNVDEVGLWVIY-STYNSNNTLVAKLDAETLK-MQYNFNITL 859
            .|..|..:.     |.|:|  |||..||.|::||| :|.|..|.:::|::..... :...::.:|
Zfish   178 DAGYNSKFPFAHLGTTYSYTDMDFVTDESGVYVIYATTSNFGNVVISKVETSNPPVLGQTWSTSL 242

  Fly   860 DHHQFGEMFIVCGNLYA---IDSGTD--------KNTQIRYVVDLYKGKLLNTNLPFSNPFSHTT 913
            ........|:|||.|||   :|..|:        |..:.||.:.::. |.:.||:         .
Zfish   243 HKRTVTNTFMVCGVLYATRYLDQETEEIFYSYDTKTNKERYDLRIHI-KKMQTNI---------Q 297

  Fly   914 TVGYNPLTVELYSWDKGNALTYPIRYNE 941
            ::.|||....||.::....:||..::.|
Zfish   298 SINYNPRDHLLYVFNDAYIVTYVTKFGE 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6867NP_573262.2 Collagen 306..364 CDD:189968
IG_like 442..525 CDD:214653
IGc2 449..511 CDD:197706
IG_like 544..612 CDD:214653
Ig 546..612 CDD:143165
OLF 694..937 CDD:280371 71/277 (26%)
LOC108179145XP_017209730.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23192
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.