DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG6867 and ntm

DIOPT Version :9

Sequence 1:	NP_573262.2	Gene:	CG6867 / 32782	FlyBaseID:	FBgn0030887	Length:	949	Species:	Drosophila melanogaster
Sequence 2:	XP_004916061.1	Gene:	ntm / 100492453	XenbaseID:	XB-GENE-6045425	Length:	374	Species:	Xenopus tropicalis

Alignment Length:	249	Identity:	73/249 - (29%)
Similarity:	110/249 - (44%)	Gaps:	54/249 - (21%)

- Green bases have known domain annotations that are detailed below.

  Fly   429 IPPSITDIQVPDFQRTVIVEEGRSLNLSCTATGTPTPQVEWR----------REDGRTINVNGVE 483
            :||.|.||     ..::.|.||.:::|.|.|.|.|.|.|.||          .||
Frog   135 VPPRIVDI-----SSSIAVNEGSNVSLICIANGRPEPVVNWRYLSPKARGFVSED---------- 184

  Fly   484 MASISGQFLRFTNITRHQMAAYTCFANNGI-APVANATYLVEVQFAPMISVYRQMIYAEYQSSAT 547
                  ::|..|.|||.|...|.|.|:|.: ||......|. |.:.|.| :..|.|.|.......
Frog   185 ------EYLEITGITREQSGIYECSASNDVSAPDVRRVKLT-VNYPPYI-LDAQNIGAPLGHRGI 241

  Fly   548 LECLVEAFPEAIRYWERAYDGKILDPSDKY-GIESYPEGFKTTMRLTISNLRKDDFGYYHCVARN 611
            |:|...|.|.|..:|.:  :.|.|  ||.: |::  .|..:|..|:|..|:.:.|:|.|.|:|:|
Frog   242 LQCEASAVPAADFFWYK--EDKRL--SDSWRGVK--VENRETISRVTFLNVSEQDYGNYTCMAKN 300

  Fly   612 EL---NATMVNFEI-----AP--QDPNSE--TPYVGNNMKVYGQRPPESECPVC 653
            .|   ||:::.||:     :|  |:.::.  ||..|.. .|:......::|..|
Frog   301 LLGHSNASIILFELFQSTSSPLLQEESTAALTPLKGPG-AVHDGNSGSTQCSFC 353

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG6867	NP_573262.2	Collagen	306..364	CDD:189968
		IG_like	442..525	CDD:214653	27/93 (29%)
		IGc2	449..511	CDD:197706	22/71 (31%)
		IG_like	544..612	CDD:214653	21/68 (31%)
		Ig	546..612	CDD:143165	21/66 (32%)
		OLF	694..937	CDD:280371
ntm	XP_004916061.1	Ig	45..133	CDD:299845
		IG_like	45..133	CDD:214653
		IG_like	143..220	CDD:214653	27/93 (29%)
		IGc2	150..209	CDD:197706	23/74 (31%)
		ig	227..311	CDD:278476	28/89 (31%)
		IG_like	230..311	CDD:214653	28/86 (33%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D265311at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010