DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6867 and myoc

DIOPT Version :10

Sequence 1:NP_573262.2 Gene:CG6867 / 32782 FlyBaseID:FBgn0030887 Length:949 Species:Drosophila melanogaster
Sequence 2:XP_002934195.3 Gene:myoc / 100489733 XenbaseID:XB-GENE-6258532 Length:499 Species:Xenopus tropicalis


Alignment Length:351 Identity:95/351 - (27%)
Similarity:154/351 - (43%) Gaps:46/351 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   624 PQDPNSETPYVGNNMKVYGQRPPESECPVCDQCP---------DPSLYQCKDSILNNF------- 672
            ||.|.|......::.|.   |.|::......|.|         ||..||...|.|...       
 Frog   161 PQVPGSSRAQAADSSKT---RVPDTSRVKDQQAPSRQVSRWGADPVGYQELKSELTALPASRMIP 222

  Fly   673 EIQATGNLSYPGLPKRPKTC-YLYAVGKPVFHKVVNE---KFGSWLRDPSPDSDREKTFVTNEN- 732
            |.|:|.:.|  ...:....| .|..:|:|..::..:.   |:|.|::||.|.:......|...| 
 Frog   223 ETQSTNHSS--ETIRADGACGELTWIGEPTTYRKADNIAGKYGVWMKDPKPLAPYTLDTVWRVNT 285

  Fly   733 ---DPYNLFEFTTRIQYRMNSIPRRKYEIQEGFHGNAHVVFNGSFYYQQRNSDLVVKLDL-TSLK 793
               |...:||: ..|...:...|.:.|.:......|..||:.||.||.:|.|.::||.|. |...
 Frog   286 VGADIRQVFEY-ENIDQLIKGYPGKVYVLPRSMESNGAVVYKGSLYYPRRKSRILVKYDFKTESV 349

  Fly   794 KITTQLPYAGVAAANRLYTTDYNY-------MDFNVDEVGLWVIYSTYNSNNTLV-AKLDAETLK 850
            .:..::|.||       |...|.|       :|..||||||||||||..:..::| :.||:|:|:
 Frog   350 AVQREIPNAG-------YQGQYPYSWGGYTDIDLAVDEVGLWVIYSTEKAKGSIVLSLLDSESLE 407

  Fly   851 MQYNFNITLDHHQFGEMFIVCGNLYAIDSGTDKNTQIRYVVDLYKGKLLNTNLPFSNPFSHTTTV 915
            ::.::...:........|::||.||.:.|.:..:|.:.:..|...|......:||.|.:.:.:.:
 Frog   408 VKQSWETQIRKQSVANAFMICGTLYTVGSYSSSSTTVNFAFDTSTGVQRPVGIPFKNQYGYASMI 472

  Fly   916 GYNPLTVELYSWDKGNALTYPIRYNE 941
            .|||...::|.||..|.:.|.:|.::
 Frog   473 DYNPTEKKIYGWDNFNMVAYDVRLSK 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6867NP_573262.2 gly_rich_SclB <257..>409 CDD:468478
Ig 436..525 CDD:472250
Ig strand B 453..457 CDD:409353
Ig strand C 466..470 CDD:409353
Ig strand E 490..494 CDD:409353
Ig strand F 504..509 CDD:409353
Ig strand G 518..521 CDD:409353
Ig_3 529..611 CDD:464046
OLF 694..939 CDD:460482 74/260 (28%)
myocXP_002934195.3 OLF 243..496 CDD:460482 74/260 (28%)
Blue background indicates that the domain is not in the aligned region.

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