Protein Alignment Sh and kch

DIOPT Version :10

• Sequence 1: NP_728123.1
• Gene: Sh / 32780
• FlyBaseID: FBgn0003380
• Length: 655
• Species: Drosophila melanogaster
• Sequence 2: NP_415766.1
• Gene: kch / 945841
• ECOCYCID: EG11606
• Length: 417
• Species: Escherichia coli
• Alignment Length: 305
• Identity: 63/305 - (20%)
• Similarity: 113/305 - (37%)
• Gaps: 93/305 - (30%)

  Fly   355 AMSLAILRVIRLVRVFRIFKLSRHSKG--------LQILGRTLKASMRELGLLIFFLFIGVVLFS 411
            |:|: ||.:|.|:.....:...:.|.|        |.||.:....|....|.:..|:....:||.
E. coli    90 AISI-ILLLIALIYTLHFYPWLKFSIGFCIFTLVFLLILRKDFSHSSAAAGTIFAFISFTTLLFY 153

  Fly   412 S---AVYFAEAGSENSFFKSIPDAFWWAVVTMTTVGYGDMTPVGVWGKIVGSLCAIAGVLTIALP 473
            |   |:|.:|  ..|...:|:..||::::.||:||||||:.||....::......|:|:...|..
E. coli   154 STYGALYLSE--GFNPRIESLMTAFYFSIETMSTVGYGDIVPVSESARLFTISVIISGITVFATS 216

  Fly   474 V-----PVIVSNF-------NYFYHRETD---------------QEEMQSQNFNHVTSCP----- 506
            :     |:|...|       |:..||:..               |...:.||...:::.|
E. coli   217 MTSIFGPLIRGGFNKLVKGNNHTMHRKDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIK 281

  Fly   507 -----------YLPGTLGQH--MKKS---------SLSESSSD-------MMDLDDGVESTPGLT 542
                       .:||.....  :||:         :||::.:|       ..|:...|::...::
E. coli   282 QLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDNDADNAFVVLSAKDMSSDVKTVLAVS 346

  Fly   543 ET---------HP---------GRSAVAPFLGAQQQQQQPVASSL 569
            ::         ||         |...:|..|..::.....:.|.|
E. coli   347 DSKNLNKIKMVHPDIILSPQLFGSEILARVLNGEEINNDMLVSML 391

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sh	NP_728123.1	BTB_POZ	97..223	CDD:453885
		Ion_trans	226..488	CDD:459842	42/155 (27%)
kch	NP_415766.1	PRK10537	3..402	CDD:236711	63/305 (21%)