DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sh and KCNK6

DIOPT Version :10

Sequence 1:NP_728123.1 Gene:Sh / 32780 FlyBaseID:FBgn0003380 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_004814.1 Gene:KCNK6 / 9424 HGNCID:6281 Length:313 Species:Homo sapiens


Alignment Length:227 Identity:41/227 - (18%)
Similarity:69/227 - (30%) Gaps:108/227 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly   389 LKASMRELGLLI-----------------------FFLFIGVVL----FSSAVYFAEAGSENSFF 426
            |.||.:.|.||:                       ....:|||:    ...||.||......||.
Human   138 LTASAQRLSLLLTHVPLSWLSMRWGWDPRRAACWHLVALLGVVVTVCFLVPAVIFAHLEEAWSFL 202

  Fly   427 KSIPDAFWWAVVTMTTVGYGDMTPVGVWG-------KIVGSLCAIAGVLTIALPVPVIVSNFNYF 484
                |||::..::::|:|.||..|....|       |::.::....|::.:.|.:          
Human   203 ----DAFYFCFISLSTIGLGDYVPGEAPGQPYRALYKVLVTVYLFLGLVAMVLVL---------- 253

  Fly   485 YHRETDQEEMQSQNFNHVTS-------------CPYLPGTLGQHMKKSSLSESSSDMMDLDDGVE 536
                        |.|.||:.             ||            :|.:....|.:|:     
Human   254 ------------QTFRHVSDLHGLTELILLPPPCP------------ASFNADEDDRVDI----- 289

  Fly   537 STPGLTETHPGRSAVAPFLGAQQQQQQPVASS 568
                              ||.|.:..|.:::|
Human   290 ------------------LGPQPESHQQLSAS 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShNP_728123.1 BTB_POZ 97..223 CDD:453885
Ion_trans 226..488 CDD:459842 27/132 (20%)
KCNK6NP_004814.1 Ion_trans_2 75..146 CDD:462301 3/7 (43%)
Selectivity filter 1. /evidence=ECO:0000250|UniProtKB:P57789 106..111
Ion_trans_2 180..256 CDD:462301 20/101 (20%)
Selectivity filter 2. /evidence=ECO:0000250|UniProtKB:P57789 214..219 2/4 (50%)
Lysosomal targeting signal. /evidence=ECO:0000250|UniProtKB:G3V8R8 282..290 2/30 (7%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 288..313 6/39 (15%)
Lysosomal targeting signal. /evidence=ECO:0000250|UniProtKB:G3V8R8 308..312
Blue background indicates that the domain is not in the aligned region.

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