DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sh and KCNG4

DIOPT Version :9

Sequence 1:NP_001303569.1 Gene:Sh / 32780 FlyBaseID:FBgn0003380 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_758857.1 Gene:KCNG4 / 93107 HGNCID:19697 Length:519 Species:Homo sapiens


Alignment Length:549 Identity:156/549 - (28%)
Similarity:253/549 - (46%) Gaps:104/549 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 QLREQQLQRNSLDG--YGSLPKLSSQDEEGGAGHGFGGGPQHFEPIPHDHDFCERVVINVSGLRF 108
            ||....::..|:.|  |..:.|:.:.|.               .|:    |..:.::|||.|.|:
Human    25 QLLSSPMETPSIKGLYYRRVRKVGALDA---------------SPV----DLKKEILINVGGRRY 70

  Fly   109 ETQLRTLNQFPDTLLGDPARRLRY-------------FDPLRNEYFFDRSRPSFDAILYYYQSGG 160
            .....||::||.:.|.    :||.             :|....|:|||||..:|..|:.:..:|.
Human    71 LLPWSTLDRFPLSRLS----KLRLCRSYEEIVQLCDDYDEDSQEFFFDRSPSAFGVIVSFLAAGK 131

  Fly   161 RLRRPVNVPLDVFSEEIKFYELGD---------QAINKFREDEGFIK-----------EEERPLP 205
            .:.......|. |.||:.::.:.:         :.:.|..|.|...|           |..||..
Human   132 LVLLQEMCALS-FQEELAYWGIEEAHLERCCLRKLLRKLEELEELAKLHREDVLRQQRETRRPAS 195

  Fly   206 DNEK----QRKVWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFKHYKVFNTTTNGTK 266
            .:.:    ..::..:.|.|:|....:|.|.:|:..:..:.|..|:.|:|:.             :
Human   196 HSSRWGLCMNRLREMVENPQSGLPGKVFACLSILFVATTAVSLCVSTMPDL-------------R 247

  Fly   267 IEED--EVPDITDPFFLIETLCIIWFTFELTVRFLACPNKLNFCRDVMNVIDIIAIIPYFITLAT 329
            .|||  |........|::||:|:.||:.|..:||:...:|..|.:..:|:|||:||.||:::|| 
Human   248 AEEDQGECSRKCYYIFIVETICVAWFSLEFCLRFVQAQDKCQFFQGPLNIIDILAISPYYVSLA- 311

  Fly   330 VVAEEEDTLNLPKAPVSPQDKSSNQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGRTLKASMR 394
             |:||.     |:....|...|..:.:.| :|||:|.:|:..:.:|:|||.|||.||.|::...|
Human   312 -VSEEP-----PEDGERPSGSSYLEKVGL-VLRVLRALRILYVMRLARHSLGLQTLGLTVRRCTR 369

  Fly   395 ELGLLIFFLFIGVVLFSSAVYFAEAGSDSSF-FKSIPDGFWWAVVTMTTVGYGDMRPVGVWGKIV 458
            |.|||:.||.:.:.|||..||.||..|.... |.|||..:|||:::|||||||||.|..|.|::|
Human   370 EFGLLLLFLAVAITLFSPLVYVAEKESGRVLEFTSIPASYWWAIISMTTVGYGDMVPRSVPGQMV 434

  Fly   459 GSLCAIAGVLTIALPVPVIVSNFNYFY-HRETDQEEMQS-----QNFNHVTSCPYL-PGTLGQHM 516
            .....::|:|.:|.|...|...|::.| ..:.:||::|:     ||....:.|..| |....:| 
Human   435 ALSSILSGILIMAFPATSIFHTFSHSYLELKKEQEQLQARLRHLQNTGPASECELLDPHVASEH- 498

  Fly   517 KKSSLSESSSDMMDLDDGVESTPGLTETH 545
                     ..|.|::|.:...|.|...|
Human   499 ---------ELMNDVNDLILEGPALPIMH 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShNP_001303569.1 BTB_2 99..187 CDD:280393 26/109 (24%)
BTB 99..182 CDD:197585 26/95 (27%)
Ion_trans 274..488 CDD:278921 85/215 (40%)
Ion_trans_2 403..479 CDD:285168 34/76 (45%)
KCNG4NP_758857.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25 156/549 (28%)
BTB 61..161 CDD:197585 26/104 (25%)
BTB_2 61..160 CDD:280393 26/103 (25%)
Ion_trans 262..465 CDD:278921 85/210 (40%)
Ion_trans_2 377..459 CDD:285168 36/81 (44%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 418..423 4/4 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000074
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.810

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