DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sh and AT1G15250

DIOPT Version :10

Sequence 1:NP_728123.1 Gene:Sh / 32780 FlyBaseID:FBgn0003380 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_172977.1 Gene:AT1G15250 / 838092 AraportID:AT1G15250 Length:95 Species:Arabidopsis thaliana


Alignment Length:10 Identity:6/10 - (60%)
Similarity:7/10 - (70%) Gaps:0/10 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 GRLRRPVNVP 169
            ||:|...|||
plant    62 GRMRYLRNVP 71

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShNP_728123.1 BTB_POZ 97..223 CDD:453885 6/10 (60%)
Ion_trans 226..488 CDD:459842
AT1G15250NP_172977.1 PTZ00073 1..91 CDD:240257 6/10 (60%)
Blue background indicates that the domain is not in the aligned region.

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