DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sh and si:ch73-334d15.4

DIOPT Version :10

Sequence 1:NP_728123.1 Gene:Sh / 32780 FlyBaseID:FBgn0003380 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_001429287.1 Gene:si:ch73-334d15.4 / 796217 ZFINID:ZDB-GENE-091204-184 Length:430 Species:Danio rerio


Alignment Length:432 Identity:153/432 - (35%)
Similarity:220/432 - (50%) Gaps:61/432 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 ERVVINVSGLRFETQLRTLNQFPDTLLGDPARRLRYF---DPLRNEYFFDRSRPSFDAILYYYQS 158
            |::|:||.|::.|| |||      ||:..|..||...   :...:|.||||....|..:|.||:|
Zfish    17 EKIVLNVGGVKHET-LRT------TLMSLPGSRLAELVNTEKSPSELFFDRHPEVFAHVLQYYRS 74

  Fly   159 GGRLRRPVNVPLDVFSEEIKFYELGDQAI-----NKFREDEGFI------------KEEERPLPD 206
             |:|..|.|:...:..||..|:.:....:     ..|::::..:            ||||.....
Zfish    75 -GKLHCPSNLCGLLLEEEFTFWGISSADVEPCCWETFQQNKETLKALAGIKPSVMKKEEESGQKQ 138

  Fly   207 NEK-----QRKVWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFKHYKVFNT-TTNGT 265
            ...     |||:|.||:.|.||..||::||||:|.|||||:.|.|.|||....::..|. .:|.|
Zfish   139 QSSSSRGWQRKIWALFDKPYSSVCARIIAIISLFFILLSIIAFSLWTLPSINSHQFLNAWASNST 203

  Fly   266 KIEEDEVPDITDPFFLIETLCIIWFTFELTVRFLACPNKLNFCRDVMNVIDIIAIIPYFITLATV 330
            .......|........:|.:|.|||.||..:|..:||:||.|..:|||::|::|:.|:|...   
Zfish   204 DDFSRTRPPEAQALDAVEIVCSIWFVFEFAIRAGSCPSKLWFFINVMNIVDLLALFPWFFRW--- 265

  Fly   331 VAEEEDTLNLPKAPVSPQDKSSN--QAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGRTLKASM 393
                                |||  ...:|..|..:|.:|:.|:|||.:|..|:::|..||:||:
Zfish   266 --------------------SSNNFSVFALGFLHAMRCIRLLRVFKLMQHVFGVRVLTHTLRASL 310

  Fly   394 RELGLLIFFLFIGVVLFSSAVYFAEAGSENSFFKSIP--DAFWWAVVTMTTVGYGDMTPVGVWGK 456
            ..|.::...|.|..::|.:..||||...::|:..|..  |.||||:||:||||||||.||...||
Zfish   311 TSLCIVPLLLSICTLIFGTMFYFAELTHKDSYISSSSGLDGFWWALVTLTTVGYGDMLPVTRQGK 375

  Fly   457 IVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETDQEEMQSQN 498
            .|..|||:.|||.|.||||:||:||..|......:..|...|
Zfish   376 CVAFLCAMVGVLLIVLPVPIIVNNFLKFSSLVKTKHSMPRMN 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShNP_728123.1 BTB_POZ 97..223 CDD:453885 44/150 (29%)
Ion_trans 226..488 CDD:459842 105/266 (39%)
si:ch73-334d15.4NP_001429287.1 None

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