DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sh and Kcng4

DIOPT Version :9

Sequence 1:NP_001303569.1 Gene:Sh / 32780 FlyBaseID:FBgn0003380 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_080010.2 Gene:Kcng4 / 66733 MGIID:1913983 Length:506 Species:Mus musculus


Alignment Length:553 Identity:159/553 - (28%)
Similarity:261/553 - (47%) Gaps:121/553 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 LSSQDEEGGAG-HGFGG---------GPQ----------------HFEPIPHDHDFCERVVINVS 104
            :||:|.:...| |.||.         ||:                :.:..|..:  .:.:::||.
Mouse     3 MSSRDRDLHPGHHHFGSCSPLSQLWPGPEPKSVKGLYYSRARKVGNQDASPEAN--LKEILVNVG 65

  Fly   105 GLRFETQLRTLNQFPDTLLGDPARRLRY-------------FDPLRNEYFFDRSRPSFDAILYYY 156
            |.|:.....||:.||.:.|.    |||.             :|....|:||||:..:|..|:.:.
Mouse    66 GQRYLLPWSTLDAFPLSRLS----RLRLCRSHEEITQLCDDYDEDSQEFFFDRNPSAFGVIVSFL 126

  Fly   157 QSGGRLRRPVNVPLDVFSEEIKFYELGDQAINK---------------FREDEGFIKEEERPLPD 206
            .:|..:.......|. |.||:.::.:.:..:.:               .|.:|...::::|....
Mouse   127 AAGKLVLLREMCALS-FREELSYWGIEETNLERCCLRKLLKKLEEAAELRREEAAQRQQQRQACH 190

  Fly   207 NEKQRKVWL--------LFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFKHYKVFNTTTN 263
            :|.|...|.        :.|.|:|....:|.|.:||..:..:.|..|:.|:|:|:          
Mouse   191 SEVQASRWARSMNQLREMVEDPQSGLPGKVFACLSVLFVATTAVSLCVSTMPDFR---------- 245

  Fly   264 GTKIEEDEVPDITDP---FFLIETLCIIWFTFELTVRFLACPNKLNFCRDVMNVIDIIAIIPYFI 325
                .|:...:.|..   .|::|::|:.||:.|..:||:..|||..|.|..:|||||:||.||::
Mouse   246 ----AEEGKGECTRKCYYIFVVESICVAWFSLEFCLRFVQAPNKCQFFRGPLNVIDILAISPYYV 306

  Fly   326 TLATVVAEEEDTLNLPKAPVSPQDKSSNQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGRTLK 390
            :||  |::|.     |:|...|...|..:.:.| :|||:|.:|:..:.:|:|||.|||.||.|::
Mouse   307 SLA--VSDES-----PEAGERPSSSSYLEKVGL-VLRVLRALRILYVMRLARHSLGLQTLGLTVR 363

  Fly   391 ASMRELGLLIFFLFIGVVLFSSAVYFAEAGSDSSF-FKSIPDGFWWAVVTMTTVGYGDMRPVGVW 454
            ...||.|||:.||.:.|.|||..||.||..|.... |.|||..:|||:::|||||||||.|..|.
Mouse   364 RCAREFGLLMLFLAVAVTLFSPLVYVAENESGRVLEFTSIPASYWWAIISMTTVGYGDMVPRSVP 428

  Fly   455 GKIVGSLCAIAGVLTIALPVPVIVSNFNYFY-HRETDQEEMQSQNFNHVTSCPYLPGTLGQHMKK 518
            |::|.....::|:|.:|.|...|...|::.| ..:.:||::|::                  :::
Mouse   429 GQMVALSSILSGILIMAFPATSIFHTFSHSYLELKREQEQVQAR------------------LRR 475

  Fly   519 SSLSESSSD---MMDLDDGVESTPGLTETHPGR 548
            ...:.|:|:   :.|:||.|..  |||.  |||
Mouse   476 LQNTNSASERELLSDVDDLVPE--GLTS--PGR 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShNP_001303569.1 BTB_2 99..187 CDD:280393 25/100 (25%)
BTB 99..182 CDD:197585 25/95 (26%)
Ion_trans 274..488 CDD:278921 90/218 (41%)
Ion_trans_2 403..479 CDD:285168 35/76 (46%)
Kcng4NP_080010.2 BTB_POZ 58..167 CDD:365784 25/113 (22%)
Ion_trans 219..463 CDD:366146 100/265 (38%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 416..421 4/4 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000074
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.810

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