DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sh and Kcnk10

DIOPT Version :10

Sequence 1:NP_728123.1 Gene:Sh / 32780 FlyBaseID:FBgn0003380 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_075584.1 Gene:Kcnk10 / 65272 RGDID:619732 Length:538 Species:Rattus norvegicus


Alignment Length:492 Identity:95/492 - (19%)
Similarity:157/492 - (31%) Gaps:161/492 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   231 IISVFVILLSIVIFCLETLPEFKHYKVFNTTTNGTKIEEDEVPDITDPFFLIETLCIIWFTFELT 295
            ::::||:   :|::.:               |.|......|.|                  ||.:
  Rat    72 VVAIFVV---VVVYLV---------------TGGLVFRALEQP------------------FESS 100

  Fly   296 VRFLACPNKLNFCRDVMNVIDIIAIIPYFITLATVVAEEEDTLNLPKAPVSPQDKSSNQA----- 355
            .:......|..|.|      |.|.:.|.  .|.|::   :..|:...|.|||...|||.:     
  Rat   101 QKNTIALEKAEFLR------DHICVSPQ--ELETLI---QHALDADNAGVSPVGNSSNSSSHWDL 154

  Fly   356 -----MSLAILRVIRLVRVF------RIFKLSRHSKGLQILGRTLKASMRELGLL---------- 399
                 .:..::..|....:.      :||.:.....|:.:.|..|.....:||.:          
  Rat   155 GSAFFFAGTVITTIGYGNIAPSTEGGKIFCILYAIFGIPLFGFLLAGIGDQLGTIFGKSIARVEK 219

  Fly   400 -----------------IFFLFIGVVLFSS--AVYFAEAGSENSFFKSIP-----DAFWWAVVTM 440
                             |.|:..|.::|.:  ||          .||.|.     ::.::.|||:
  Rat   220 VFRKKQVSQTKIRVISTILFILAGCIVFVTIPAV----------IFKYIEGWTALESIYFVVVTL 274

  Fly   441 TTVGYGDMTPVG-------------VWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETDQE 492
            ||||:||....|             ||..|:..|...|.||:       ::.::.....::|.:|
  Rat   275 TTVGFGDFVAGGNAGINYREWYKPLVWFWILVGLAYFAAVLS-------MIGDWLRVLSKKTKEE 332

  Fly   493 EMQSQNFNHVTSCPYLPGTLGQH---MKKSSLSESSSDMMDLDDGVESTPGLTETHPGRSAVAPF 554
                            .|.:..|   .|.:..:|.......|  .||....|......||.....
  Rat   333 ----------------VGEIKAHAAEWKANVTAEFRETRRRL--SVEIHDKLQRAATIRSMERRR 379

  Fly   555 LGAQQQQQQPVASSLSMSIDKQLQHPLQQLTQTQLYQQQQQQQQQQQNGFKQQQQQTQQQLQQQQ 619
            ||..|:     |.||.| :..:.:.....|...:.....|:....:.|..:.:..      :|..
  Rat   380 LGLDQR-----AHSLDM-LSPEKRSVFAALDTGRFKASSQESINNRPNNLRLKGP------EQLN 432

  Fly   620 SHTINASAAAATSGSGS-SGLTMRHNNALAVSIETDV 655
            .|...||.....:..|| |.||.|.|..|..::..||
  Rat   433 KHGQGASEDNIINKFGSTSKLTKRKNKDLKKTLPEDV 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShNP_728123.1 BTB_POZ 97..223 CDD:453885
Ion_trans 226..488 CDD:459842 59/319 (18%)
Kcnk10NP_075584.1 Ion_trans_2 <150..206 CDD:462301 6/55 (11%)
Selectivity filter 1. /evidence=ECO:0000250|UniProtKB:P57789 167..172 1/4 (25%)
Ion_trans_2 244..323 CDD:462301 23/95 (24%)
Selectivity filter 2. /evidence=ECO:0000250|UniProtKB:P57789 276..281 3/4 (75%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 412..444 6/37 (16%)
Blue background indicates that the domain is not in the aligned region.

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