DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sh and kcnk10b

DIOPT Version :10

Sequence 1:NP_728123.1 Gene:Sh / 32780 FlyBaseID:FBgn0003380 Length:655 Species:Drosophila melanogaster
Sequence 2:XP_005169840.1 Gene:kcnk10b / 565629 ZFINID:ZDB-GENE-050420-31 Length:575 Species:Danio rerio


Alignment Length:408 Identity:73/408 - (17%)
Similarity:147/408 - (36%) Gaps:126/408 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   307 FCRDVMNVIDIIAIIPYFITLATVVAEEEDTLNLPKAPVSPQDKSSNQAMSLAILRVIRLVRVFR 371
            ||     ::..|..||.|..|...|.::..|:.:         ||           ::|:.:|||
Zfish   208 FC-----ILYAIFGIPLFGFLLAGVGDQLGTMFM---------KS-----------ILRVEKVFR 247

  Fly   372 IFKLSRHSKGLQILGRTLKASMRELGLLIFFLFIGVVLFSS--AVYFAEAGSENSFFKSIPDAFW 434
                   .|..||....::.:.     .|.|:..|.::|.:  ||:|......::.     ||.:
Zfish   248 -------QKHKQISQTKIRVTS-----TILFIIAGCIVFVTIPAVFFKHTEGWSTL-----DAIY 295

  Fly   435 WAVVTMTTVGYGDMTPVG-------------VWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYH 486
            :.|:|:||:|.||....|             ||..|:..|...|.||:       ::.::.....
Zfish   296 FVVITLTTIGIGDYVAGGDRKIEYMKWYKPLVWFWILVGLAYFAAVLS-------MIGDWLRVLS 353

  Fly   487 RETDQEEMQSQNFNHVTSCPY--------------LPGTLGQHMKKSSLSES-SSDMMDLDDGVE 536
            ::|.:|..|........:..:              |.|.:...:::::...| ....:.|:....
Zfish   354 KKTKEEVGQQVGGIKAHAVEWKANVRAELRETRRRLSGEIHDKLQRAATIRSMERRRLGLEQRAH 418

  Fly   537 STPGLTETHPGRSAVAPFLGA---QQQQQQPVASSLS------------MSIDKQLQHPLQQLTQ 586
            |...|:   |.:.||...|.|   :...|:.:.:.|:            .|.::.:.:....||:
Zfish   419 SLDMLS---PEKRAVFASLDAGRFKTSSQESIDTKLNNLRLKAKCGEQQTSSEENIFNRFGSLTK 480

  Fly   587 ----------TQLYQQQQQQQQQQQN---GFKQQQQQTQQQLQQQQSHTINASAAAATSGSGSSG 638
                      .:..|:...|..:..|   |.::|:::.:.|:::::...:...|        ::|
Zfish   481 LAKRNRSKDLRRNIQEDPTQIDELDNVTLGEERQEEEDEDQMEEEEEEKVEKQA--------NTG 537

  Fly   639 LTM--------RHNNALA 648
            .|.        :..|.||
Zfish   538 FTCLPHYPEEPKQQNGLA 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShNP_728123.1 BTB_POZ 97..223 CDD:453885
Ion_trans 226..488 CDD:459842 42/195 (22%)
kcnk10bXP_005169840.1 Ion_trans_2 165..231 CDD:462301 8/27 (30%)
Ion_trans_2 263..350 CDD:462301 24/98 (24%)
Blue background indicates that the domain is not in the aligned region.

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