DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sh and kcnk2a

DIOPT Version :10

Sequence 1:NP_728123.1 Gene:Sh / 32780 FlyBaseID:FBgn0003380 Length:655 Species:Drosophila melanogaster
Sequence 2:XP_021323122.1 Gene:kcnk2a / 559728 ZFINID:ZDB-GENE-061226-2 Length:426 Species:Danio rerio


Alignment Length:257 Identity:56/257 - (21%)
Similarity:93/257 - (36%) Gaps:81/257 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   279 FFLIETLCIIWFTFELTVRFLACPNK-LNFCRDVMNVIDIIAIIPYFITLATVV--AEEEDTLN- 339
            |.|:....||..|   ..:.|..|.: |...|.:...||       |:::.|.|  :|.||.:. 
Zfish    64 FLLVVLYLIIGAT---VFKALEQPEEGLQKYRIIQEKID-------FLSMHTCVNTSELEDLVKQ 118

  Fly   340 ---LPKAPVSPQDKSSNQA----MSLAILRVIRLVRVFRIFKLSRHSKGLQILGRTLKASMRELG 397
               ..:|.|:|....||::    :|.:......::.......:|.|::|    ||........||
Zfish   119 VVLAIRAGVNPSGHPSNESSMWDLSSSFFFAGTVITTIGFGNVSPHTEG----GRIFCIIYALLG 179

  Fly   398 LLIF-FLFIGV----------------------------VLFSSAVYFAEAGSENSFFKSIP--- 430
            :.:| ||..||                            :..:|.|.|...|.  ..|.::|   
Zfish   180 IPLFGFLLAGVGDQLGTIFGKGIAKVEKMFVKWNVSQTKIRVTSTVLFILFGC--LLFVALPALI 242

  Fly   431 ----------DAFWWAVVTMTTVGYGDMTPVG------------VWGKIVGSLCAIAGVLTI 470
                      ::.::.|:|:||:|:||....|            ||..|:..|...|.||::
Zfish   243 FQHIEGWSALESIYFVVITLTTIGFGDFVAGGSEIEYLDYYKPIVWFWILVGLAYFAAVLSM 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShNP_728123.1 BTB_POZ 97..223 CDD:453885
Ion_trans 226..488 CDD:459842 56/257 (22%)
kcnk2aXP_021323122.1 Ion_trans_2 <136..194 CDD:462301 13/61 (21%)
Ion_trans_2 232..310 CDD:462301 17/75 (23%)
Blue background indicates that the domain is not in the aligned region.

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